Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx2P43241 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx2P43241 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx2P43241 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx2P43241 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx2P43241 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Cdx2P43241 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx2P43241 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx2P43241 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Cdx2P43241 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx2P43241 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cdx2P43241 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.44□□□□□ -0.74
Cdx2P43241 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Cdx2P43241 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.43□□□□□ -0.74
Cdx2P43241 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx2P43241 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx2P43241 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Cdx2P43241 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx2P43241 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx2P43241 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx2P43241 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Cdx2P43241 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx2P43241 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx2P43241 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx2P43241 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Cdx2P43241 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx2P43241 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx2P43241 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx2P43241 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx2P43241 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx2P43241 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx2P43241 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx2P43241 Bcl2-202ENSMUST00000189999 2841 ntBASIC10.43□□□□□ -0.74
Cdx2P43241 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC10.43□□□□□ -0.74
Cdx2P43241 Gm15746-201ENSMUST00000120684 1027 ntBASIC10.43□□□□□ -0.74
Cdx2P43241 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Cdx2P43241 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx2P43241 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC10.43□□□□□ -0.74
Cdx2P43241 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx2P43241 Gm29543-201ENSMUST00000188138 967 ntBASIC10.43□□□□□ -0.74
Cdx2P43241 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC10.43□□□□□ -0.74
Cdx2P43241 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC10.43□□□□□ -0.74
Cdx2P43241 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
Cdx2P43241 Gm37851-201ENSMUST00000193871 889 ntBASIC10.43□□□□□ -0.74
Cdx2P43241 Gm8643-201ENSMUST00000195228 625 ntBASIC10.43□□□□□ -0.74
Cdx2P43241 Gm43097-201ENSMUST00000196867 151 ntBASIC10.43□□□□□ -0.74
Cdx2P43241 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx2P43241 Saa-ps-201ENSMUST00000211148 320 ntBASIC10.43□□□□□ -0.74
Cdx2P43241 Gm9619-201ENSMUST00000211587 762 ntBASIC10.43□□□□□ -0.74
Cdx2P43241 Gm7904-201ENSMUST00000217049 465 ntBASIC10.43□□□□□ -0.74
Cdx2P43241 Gm8170-201ENSMUST00000218581 945 ntBASIC10.43□□□□□ -0.74
Cdx2P43241 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Cdx2P43241 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx2P43241 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx2P43241 AC153524.2-202ENSMUST00000220401 1794 ntBASIC10.43□□□□□ -0.74
Cdx2P43241 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.43□□□□□ -0.74
Cdx2P43241 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx2P43241 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx2P43241 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.43□□□□□ -0.74
Cdx2P43241 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC10.43□□□□□ -0.74
Cdx2P43241 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Cdx2P43241 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.43□□□□□ -0.74
Cdx2P43241 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cdx2P43241 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Cdx2P43241 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.42□□□□□ -0.74
Cdx2P43241 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx2P43241 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx2P43241 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx2P43241 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx2P43241 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx2P43241 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx2P43241 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx2P43241 Gm8873-201ENSMUST00000217847 1439 ntBASIC10.42□□□□□ -0.74
Cdx2P43241 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx2P43241 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx2P43241 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx2P43241 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx2P43241 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx2P43241 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx2P43241 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx2P43241 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Cdx2P43241 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Cdx2P43241 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx2P43241 Gm23604-201ENSMUST00000104311 132 ntBASIC10.42□□□□□ -0.74
Cdx2P43241 Gm14006-201ENSMUST00000122132 981 ntBASIC10.42□□□□□ -0.74
Cdx2P43241 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx2P43241 Gm15258-201ENSMUST00000153801 741 ntBASIC10.42□□□□□ -0.74
Cdx2P43241 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC10.42□□□□□ -0.74
Cdx2P43241 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Cdx2P43241 Gm5976-201ENSMUST00000180794 996 ntBASIC10.42□□□□□ -0.74
Cdx2P43241 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Cdx2P43241 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC10.42□□□□□ -0.74
Cdx2P43241 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC10.42□□□□□ -0.74
Cdx2P43241 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC10.42□□□□□ -0.74
Cdx2P43241 CT010505.2-201ENSMUST00000227918 998 ntBASIC10.42□□□□□ -0.74
Cdx2P43241 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
Cdx2P43241 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx2P43241 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx2P43241 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Cdx2P43241 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms