Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
Nedd8P29595 Gm11783-201ENSMUST00000119549 885 ntBASIC10.01□□□□□ -0.81
Nedd8P29595 Gm15806-201ENSMUST00000120696 955 ntBASIC10.01□□□□□ -0.81
Nedd8P29595 Gm12138-201ENSMUST00000122180 951 ntBASIC10.01□□□□□ -0.81
Nedd8P29595 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 Gm25661-201ENSMUST00000157704 296 ntBASIC10.01□□□□□ -0.81
Nedd8P29595 Gm5866-201ENSMUST00000177881 973 ntBASIC10.01□□□□□ -0.81
Nedd8P29595 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.01□□□□□ -0.81
Nedd8P29595 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.01□□□□□ -0.81
Nedd8P29595 Gm45059-201ENSMUST00000205558 1077 ntBASIC10.01□□□□□ -0.81
Nedd8P29595 Gm19187-201ENSMUST00000206781 892 ntBASIC10.01□□□□□ -0.81
Nedd8P29595 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 Gm6013-201ENSMUST00000212264 699 ntBASIC10.01□□□□□ -0.81
Nedd8P29595 Gm19208-201ENSMUST00000213861 912 ntBASIC10.01□□□□□ -0.81
Nedd8P29595 Gm8712-201ENSMUST00000221090 701 ntBASIC10.01□□□□□ -0.81
Nedd8P29595 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Nedd8P29595 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
Nedd8P29595 Gm25125-201ENSMUST00000083340 136 ntBASIC10.01□□□□□ -0.81
Nedd8P29595 Dgcr2-204ENSMUST00000117945 4003 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 Igf2bp3-201ENSMUST00000031838 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 Zscan21-202ENSMUST00000080732 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 Ap2b1-201ENSMUST00000018875 5625 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 0610030E20Rik-201ENSMUST00000077783 4605 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 Cep95-202ENSMUST00000103068 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 Dhcr7-202ENSMUST00000124340 2556 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
Nedd8P29595 Gm42460-201ENSMUST00000198863 2567 ntBASIC10.01□□□□□ -0.81
Nedd8P29595 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 Bbs9-209ENSMUST00000147405 3045 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
Nedd8P29595 Stoml3-201ENSMUST00000029307 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 Entpd1-204ENSMUST00000134063 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Nedd8P29595 Pex5-203ENSMUST00000112530 3051 ntTSL 5 BASIC10.01□□□□□ -0.81
Nedd8P29595 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 Actn2-203ENSMUST00000168193 2920 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Nedd8P29595 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 Fam171a1-202ENSMUST00000072955 3364 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 Park2-209ENSMUST00000191124 3202 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 Plod1-201ENSMUST00000019199 3243 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 Dsg1a-201ENSMUST00000077146 5686 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 Gm4454-201ENSMUST00000190585 2578 ntBASIC10□□□□□ -0.81
Nedd8P29595 Wiz-203ENSMUST00000087703 4175 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 Sgo2b-201ENSMUST00000179944 3739 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Nedd8P29595 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC10□□□□□ -0.81
Nedd8P29595 Dclk1-203ENSMUST00000167204 6025 ntTSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 C230057M02Rik-201ENSMUST00000212334 3306 ntTSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 Heatr6-201ENSMUST00000001002 5614 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 Gm45191-201ENSMUST00000205846 5439 ntBASIC10□□□□□ -0.81
Nedd8P29595 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC10□□□□□ -0.81
Nedd8P29595 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10□□□□□ -0.81
Nedd8P29595 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10□□□□□ -0.81
Nedd8P29595 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Nedd8P29595 Saa-ps-201ENSMUST00000211148 320 ntBASIC10□□□□□ -0.81
Nedd8P29595 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC10□□□□□ -0.81
Nedd8P29595 AC154239.3-201ENSMUST00000226933 674 ntBASIC10□□□□□ -0.81
Nedd8P29595 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC10□□□□□ -0.81
Nedd8P29595 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10□□□□□ -0.81
Nedd8P29595 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 Brcc3-201ENSMUST00000033544 4310 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Nedd8P29595 Eea1-201ENSMUST00000053484 7749 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Nedd8P29595 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 Osbpl5-202ENSMUST00000119499 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 Slc7a14-202ENSMUST00000108245 3080 ntTSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 Zfp114-201ENSMUST00000086010 3332 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 N4bp2-201ENSMUST00000087264 5308 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Nedd8P29595 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Nedd8P29595 9530026P05Rik-201ENSMUST00000181121 2142 ntTSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Nedd8P29595 Calr4-204ENSMUST00000106631 2155 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Nedd8P29595 Xrcc2-201ENSMUST00000030773 3247 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nedd8P29595 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Nedd8P29595 Arid5a-202ENSMUST00000115029 4329 ntTSL 3 BASIC9.99□□□□□ -0.81
Nedd8P29595 Osbpl1a-204ENSMUST00000119043 2522 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Nedd8P29595 Stk36-201ENSMUST00000087183 5245 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Nedd8P29595 Zfp111-201ENSMUST00000056683 3380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nedd8P29595 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nedd8P29595 Kif13b-203ENSMUST00000224503 8865 ntAPPRIS ALT2 BASIC9.99□□□□□ -0.81
Nedd8P29595 Elavl1-204ENSMUST00000209010 2317 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Nedd8P29595 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Nedd8P29595 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Nedd8P29595 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nedd8P29595 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC9.99□□□□□ -0.81
Nedd8P29595 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Nedd8P29595 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC9.99□□□□□ -0.81
Nedd8P29595 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 101.1 ms