Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Vcam1P29533 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vcam1P29533 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vcam1P29533 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vcam1P29533 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vcam1P29533 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.56□□□□□ -0.4
Vcam1P29533 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Vcam1P29533 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC12.56□□□□□ -0.4
Vcam1P29533 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 Gm42521-201ENSMUST00000199190 2040 ntBASIC12.56□□□□□ -0.4
Vcam1P29533 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 Gm23595-201ENSMUST00000104306 130 ntBASIC12.56□□□□□ -0.4
Vcam1P29533 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 Gm12397-201ENSMUST00000117674 615 ntBASIC12.56□□□□□ -0.4
Vcam1P29533 Gm16518-201ENSMUST00000117960 508 ntBASIC12.56□□□□□ -0.4
Vcam1P29533 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC12.56□□□□□ -0.4
Vcam1P29533 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC12.56□□□□□ -0.4
Vcam1P29533 Gm6425-201ENSMUST00000136332 790 ntBASIC12.56□□□□□ -0.4
Vcam1P29533 Gm25604-201ENSMUST00000158359 133 ntBASIC12.56□□□□□ -0.4
Vcam1P29533 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 Gm5801-201ENSMUST00000182247 780 ntBASIC12.56□□□□□ -0.4
Vcam1P29533 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Vcam1P29533 Gm29543-201ENSMUST00000188138 967 ntBASIC12.56□□□□□ -0.4
Vcam1P29533 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC12.56□□□□□ -0.4
Vcam1P29533 Gm3527-201ENSMUST00000198905 460 ntBASIC12.56□□□□□ -0.4
Vcam1P29533 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC12.56□□□□□ -0.4
Vcam1P29533 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC12.56□□□□□ -0.4
Vcam1P29533 Gm3926-201ENSMUST00000223378 1123 ntBASIC12.56□□□□□ -0.4
Vcam1P29533 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 Gm6564-201ENSMUST00000075377 619 ntBASIC12.56□□□□□ -0.4
Vcam1P29533 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Vcam1P29533 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.56□□□□□ -0.4
Vcam1P29533 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.56□□□□□ -0.4
Vcam1P29533 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.56□□□□□ -0.4
Vcam1P29533 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Vcam1P29533 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 Gm17836-201ENSMUST00000191976 1302 ntBASIC12.56□□□□□ -0.4
Vcam1P29533 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC12.56□□□□□ -0.4
Vcam1P29533 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Vcam1P29533 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vcam1P29533 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcam1P29533 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcam1P29533 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vcam1P29533 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcam1P29533 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcam1P29533 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcam1P29533 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC12.55□□□□□ -0.4
Vcam1P29533 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vcam1P29533 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcam1P29533 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Vcam1P29533 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcam1P29533 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vcam1P29533 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vcam1P29533 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vcam1P29533 Gm24933-201ENSMUST00000103762 110 ntBASIC12.55□□□□□ -0.4
Vcam1P29533 Gm23252-201ENSMUST00000103776 110 ntBASIC12.55□□□□□ -0.4
Vcam1P29533 Gm24279-201ENSMUST00000104236 131 ntBASIC12.55□□□□□ -0.4
Vcam1P29533 Gm22495-201ENSMUST00000104492 126 ntBASIC12.55□□□□□ -0.4
Vcam1P29533 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC12.55□□□□□ -0.4
Vcam1P29533 Gm13688-201ENSMUST00000121557 608 ntBASIC12.55□□□□□ -0.4
Vcam1P29533 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vcam1P29533 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC12.55□□□□□ -0.4
Vcam1P29533 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Vcam1P29533 Gm26443-201ENSMUST00000179610 110 ntBASIC12.55□□□□□ -0.4
Vcam1P29533 Gm11942-201ENSMUST00000180255 345 ntBASIC12.55□□□□□ -0.4
Vcam1P29533 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC12.55□□□□□ -0.4
Vcam1P29533 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC12.55□□□□□ -0.4
Vcam1P29533 Gm5865-201ENSMUST00000198713 637 ntBASIC12.55□□□□□ -0.4
Vcam1P29533 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Vcam1P29533 Gm9619-201ENSMUST00000211587 762 ntBASIC12.55□□□□□ -0.4
Vcam1P29533 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vcam1P29533 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC12.55□□□□□ -0.4
Vcam1P29533 AC101205.2-201ENSMUST00000226206 715 ntBASIC12.55□□□□□ -0.4
Vcam1P29533 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vcam1P29533 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Vcam1P29533 Gm10238-201ENSMUST00000089689 408 ntBASIC12.55□□□□□ -0.4
Vcam1P29533 Atf7-201ENSMUST00000096143 390 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms