Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.28□□□□□ -0.6
Hoxb3P09026 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.28□□□□□ -0.6
Hoxb3P09026 AC117769.1-201ENSMUST00000224716 1120 ntBASIC11.28□□□□□ -0.6
Hoxb3P09026 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxb3P09026 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC11.28□□□□□ -0.6
Hoxb3P09026 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Hoxb3P09026 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxb3P09026 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxb3P09026 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxb3P09026 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Hoxb3P09026 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxb3P09026 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxb3P09026 Matn2-203ENSMUST00000226766 3252 ntBASIC11.28□□□□□ -0.6
Hoxb3P09026 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC11.28□□□□□ -0.6
Hoxb3P09026 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxb3P09026 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxb3P09026 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxb3P09026 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxb3P09026 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxb3P09026 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Hoxb3P09026 Gm7841-201ENSMUST00000122108 1629 ntBASIC11.27□□□□□ -0.6
Hoxb3P09026 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.6
Hoxb3P09026 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hoxb3P09026 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Hoxb3P09026 Ccser2-203ENSMUST00000182042 1420 ntTSL 5 BASIC11.27□□□□□ -0.6
Hoxb3P09026 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hoxb3P09026 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hoxb3P09026 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Hoxb3P09026 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hoxb3P09026 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Hoxb3P09026 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.27□□□□□ -0.6
Hoxb3P09026 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Hoxb3P09026 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Hoxb3P09026 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxb3P09026 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.27□□□□□ -0.61
Hoxb3P09026 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Hoxb3P09026 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxb3P09026 Gm38246-201ENSMUST00000194318 1511 ntBASIC11.27□□□□□ -0.61
Hoxb3P09026 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Hoxb3P09026 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxb3P09026 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxb3P09026 Gm13422-201ENSMUST00000118834 504 ntBASIC11.27□□□□□ -0.61
Hoxb3P09026 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC11.27□□□□□ -0.61
Hoxb3P09026 Gm15570-201ENSMUST00000122093 625 ntBASIC11.27□□□□□ -0.61
Hoxb3P09026 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxb3P09026 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxb3P09026 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Hoxb3P09026 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxb3P09026 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC11.27□□□□□ -0.61
Hoxb3P09026 Gm24328-201ENSMUST00000175104 67 ntBASIC11.27□□□□□ -0.61
Hoxb3P09026 Mir669a-7-201ENSMUST00000180364 87 ntBASIC11.27□□□□□ -0.61
Hoxb3P09026 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxb3P09026 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxb3P09026 Asb4-202ENSMUST00000183358 1143 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxb3P09026 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.27□□□□□ -0.61
Hoxb3P09026 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxb3P09026 Gm37218-201ENSMUST00000192917 390 ntTSL 2 BASIC11.27□□□□□ -0.61
Hoxb3P09026 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxb3P09026 Mir669a-6-201ENSMUST00000196127 87 ntBASIC11.27□□□□□ -0.61
Hoxb3P09026 Gm43163-201ENSMUST00000196571 442 ntBASIC11.27□□□□□ -0.61
Hoxb3P09026 Mir669a-12-201ENSMUST00000197274 87 ntBASIC11.27□□□□□ -0.61
Hoxb3P09026 Mir669a-5-201ENSMUST00000197439 87 ntBASIC11.27□□□□□ -0.61
Hoxb3P09026 Mir669a-10-201ENSMUST00000197745 87 ntBASIC11.27□□□□□ -0.61
Hoxb3P09026 Mir669a-11-201ENSMUST00000197952 87 ntBASIC11.27□□□□□ -0.61
Hoxb3P09026 Mir669a-4-201ENSMUST00000198665 87 ntBASIC11.27□□□□□ -0.61
Hoxb3P09026 Mir669a-9-201ENSMUST00000200087 87 ntBASIC11.27□□□□□ -0.61
Hoxb3P09026 Mir669a-8-201ENSMUST00000200268 87 ntBASIC11.27□□□□□ -0.61
Hoxb3P09026 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.27□□□□□ -0.61
Hoxb3P09026 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.27□□□□□ -0.61
Hoxb3P09026 Gm43867-201ENSMUST00000203860 525 ntBASIC11.27□□□□□ -0.61
Hoxb3P09026 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxb3P09026 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC11.27□□□□□ -0.61
Hoxb3P09026 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC11.27□□□□□ -0.61
Hoxb3P09026 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC11.27□□□□□ -0.61
Hoxb3P09026 AC126673.2-201ENSMUST00000221052 686 ntBASIC11.27□□□□□ -0.61
Hoxb3P09026 AC102352.1-201ENSMUST00000224187 582 ntBASIC11.27□□□□□ -0.61
Hoxb3P09026 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxb3P09026 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hoxb3P09026 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Hoxb3P09026 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hoxb3P09026 Gm10263-201ENSMUST00000085163 300 ntBASIC11.27□□□□□ -0.61
Hoxb3P09026 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hoxb3P09026 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hoxb3P09026 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxb3P09026 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxb3P09026 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxb3P09026 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxb3P09026 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxb3P09026 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxb3P09026 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hoxb3P09026 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxb3P09026 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxb3P09026 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Hoxb3P09026 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.27□□□□□ -0.61
Hoxb3P09026 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hoxb3P09026 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Hoxb3P09026 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.27□□□□□ -0.61
Hoxb3P09026 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Hoxb3P09026 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Hoxb3P09026 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms