Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
PdgfrbP05622 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.18□□□□□ -0.62
PdgfrbP05622 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.18□□□□□ -0.62
PdgfrbP05622 Gm25843-201ENSMUST00000122582 314 ntBASIC11.18□□□□□ -0.62
PdgfrbP05622 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 Gm19459-201ENSMUST00000176240 835 ntBASIC11.18□□□□□ -0.62
PdgfrbP05622 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.18□□□□□ -0.62
PdgfrbP05622 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
PdgfrbP05622 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
PdgfrbP05622 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 Gm6098-201ENSMUST00000180234 330 ntBASIC11.18□□□□□ -0.62
PdgfrbP05622 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.18□□□□□ -0.62
PdgfrbP05622 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.18□□□□□ -0.62
PdgfrbP05622 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC11.18□□□□□ -0.62
PdgfrbP05622 Gm43947-201ENSMUST00000203019 959 ntBASIC11.18□□□□□ -0.62
PdgfrbP05622 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 Gm9463-201ENSMUST00000206707 601 ntBASIC11.18□□□□□ -0.62
PdgfrbP05622 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.18□□□□□ -0.62
PdgfrbP05622 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
PdgfrbP05622 AC153522.1-201ENSMUST00000220047 1090 ntBASIC11.18□□□□□ -0.62
PdgfrbP05622 AC159205.7-201ENSMUST00000225988 692 ntBASIC11.18□□□□□ -0.62
PdgfrbP05622 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.18□□□□□ -0.62
PdgfrbP05622 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.18□□□□□ -0.62
PdgfrbP05622 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
PdgfrbP05622 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.18□□□□□ -0.62
PdgfrbP05622 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
PdgfrbP05622 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
PdgfrbP05622 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
PdgfrbP05622 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
PdgfrbP05622 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.17□□□□□ -0.62
PdgfrbP05622 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PdgfrbP05622 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PdgfrbP05622 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
PdgfrbP05622 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
PdgfrbP05622 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
PdgfrbP05622 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
PdgfrbP05622 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
PdgfrbP05622 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
PdgfrbP05622 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
PdgfrbP05622 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
PdgfrbP05622 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PdgfrbP05622 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
PdgfrbP05622 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PdgfrbP05622 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
PdgfrbP05622 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
PdgfrbP05622 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.17□□□□□ -0.62
PdgfrbP05622 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
PdgfrbP05622 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.17□□□□□ -0.62
PdgfrbP05622 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
PdgfrbP05622 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC11.17□□□□□ -0.62
PdgfrbP05622 Gm13255-201ENSMUST00000117255 547 ntBASIC11.17□□□□□ -0.62
PdgfrbP05622 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.17□□□□□ -0.62
PdgfrbP05622 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.17□□□□□ -0.62
PdgfrbP05622 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.17□□□□□ -0.62
PdgfrbP05622 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
PdgfrbP05622 Gm5542-201ENSMUST00000195485 1089 ntBASIC11.17□□□□□ -0.62
PdgfrbP05622 Gm8920-201ENSMUST00000196153 924 ntBASIC11.17□□□□□ -0.62
PdgfrbP05622 Gm5302-201ENSMUST00000202130 796 ntBASIC11.17□□□□□ -0.62
PdgfrbP05622 Gm43974-201ENSMUST00000205080 684 ntBASIC11.17□□□□□ -0.62
PdgfrbP05622 Gm44760-201ENSMUST00000206375 1173 ntBASIC11.17□□□□□ -0.62
PdgfrbP05622 Gm45733-201ENSMUST00000212988 437 ntBASIC11.17□□□□□ -0.62
PdgfrbP05622 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
PdgfrbP05622 Gm9111-201ENSMUST00000219394 709 ntBASIC11.17□□□□□ -0.62
PdgfrbP05622 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC11.17□□□□□ -0.62
PdgfrbP05622 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
PdgfrbP05622 AC154252.1-201ENSMUST00000226041 473 ntBASIC11.17□□□□□ -0.62
PdgfrbP05622 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PdgfrbP05622 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
PdgfrbP05622 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PdgfrbP05622 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PdgfrbP05622 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.17□□□□□ -0.62
PdgfrbP05622 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PdgfrbP05622 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
PdgfrbP05622 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 115.5 ms