Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Cckar-202ENSMUST00000200691 3230 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
P01788 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
P01788 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
P01788 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC8.61□□□□□ -1.03
P01788 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
P01788 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC8.6□□□□□ -1.03
P01788 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
P01788 Gm33366-201ENSMUST00000195583 3827 ntBASIC8.6□□□□□ -1.03
P01788 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC8.6□□□□□ -1.03
P01788 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 Gm21358-201ENSMUST00000191645 1659 ntBASIC8.6□□□□□ -1.03
P01788 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 Gm22920-201ENSMUST00000102175 109 ntBASIC8.6□□□□□ -1.03
P01788 Gm15528-201ENSMUST00000117821 864 ntBASIC8.6□□□□□ -1.03
P01788 Gm12266-201ENSMUST00000120311 962 ntBASIC8.6□□□□□ -1.03
P01788 Gm9089-201ENSMUST00000122027 526 ntBASIC8.6□□□□□ -1.03
P01788 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC8.6□□□□□ -1.03
P01788 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC8.6□□□□□ -1.03
P01788 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC8.6□□□□□ -1.03
P01788 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC8.6□□□□□ -1.03
P01788 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC8.6□□□□□ -1.03
P01788 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC8.6□□□□□ -1.03
P01788 Gm6397-201ENSMUST00000161973 1069 ntBASIC8.6□□□□□ -1.03
P01788 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
P01788 Gm37284-201ENSMUST00000193607 539 ntBASIC8.6□□□□□ -1.03
P01788 Gstp-ps-201ENSMUST00000195526 631 ntBASIC8.6□□□□□ -1.03
P01788 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC8.6□□□□□ -1.03
P01788 AU022133-201ENSMUST00000200601 873 ntBASIC8.6□□□□□ -1.03
P01788 Gm43916-201ENSMUST00000205062 967 ntBASIC8.6□□□□□ -1.03
P01788 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 Gm45909-201ENSMUST00000212413 1031 ntBASIC8.6□□□□□ -1.03
P01788 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC8.6□□□□□ -1.03
P01788 Gm5369-201ENSMUST00000217499 588 ntBASIC8.6□□□□□ -1.03
P01788 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC8.6□□□□□ -1.03
P01788 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 Kcng4-201ENSMUST00000061828 3806 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 Gm7551-201ENSMUST00000089593 1074 ntBASIC8.6□□□□□ -1.03
P01788 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
P01788 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC8.6□□□□□ -1.03
P01788 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
P01788 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
P01788 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
P01788 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
P01788 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC8.6□□□□□ -1.03
P01788 Vps33a-201ENSMUST00000031388 4235 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
P01788 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
P01788 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC8.59□□□□□ -1.03
P01788 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
P01788 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC8.59□□□□□ -1.03
P01788 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
P01788 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
P01788 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
P01788 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
P01788 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
P01788 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
P01788 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
P01788 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
P01788 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC8.59□□□□□ -1.03
P01788 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
P01788 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC8.59□□□□□ -1.03
P01788 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
P01788 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC8.59□□□□□ -1.03
P01788 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC8.59□□□□□ -1.03
P01788 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
P01788 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
P01788 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
P01788 Srpk1-204ENSMUST00000130643 4465 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
P01788 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
P01788 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
P01788 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
P01788 n-R5s64-201ENSMUST00000102019 119 ntBASIC8.59□□□□□ -1.03
P01788 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
P01788 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
P01788 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
P01788 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 227.2 ms