Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf6F6VAN0 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.29□□□□□ -0.6
Atf6F6VAN0 AA474408-201ENSMUST00000098110 3339 ntBASIC11.29□□□□□ -0.6
Atf6F6VAN0 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf6F6VAN0 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.28□□□□□ -0.6
Atf6F6VAN0 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Atf6F6VAN0 AC154528.2-201ENSMUST00000228432 3023 ntBASIC11.28□□□□□ -0.6
Atf6F6VAN0 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Gm15197-201ENSMUST00000120526 478 ntBASIC11.28□□□□□ -0.6
Atf6F6VAN0 Gm13284-201ENSMUST00000121020 547 ntBASIC11.28□□□□□ -0.6
Atf6F6VAN0 Gm25116-201ENSMUST00000157191 122 ntBASIC11.28□□□□□ -0.6
Atf6F6VAN0 Gm23958-201ENSMUST00000157207 105 ntBASIC11.28□□□□□ -0.6
Atf6F6VAN0 Gm17391-201ENSMUST00000171036 126 ntBASIC11.28□□□□□ -0.6
Atf6F6VAN0 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.28□□□□□ -0.6
Atf6F6VAN0 Gm28032-201ENSMUST00000184104 96 ntBASIC11.28□□□□□ -0.6
Atf6F6VAN0 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC11.28□□□□□ -0.6
Atf6F6VAN0 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Gm37436-201ENSMUST00000193842 1085 ntBASIC11.28□□□□□ -0.6
Atf6F6VAN0 Gm43163-201ENSMUST00000196571 442 ntBASIC11.28□□□□□ -0.6
Atf6F6VAN0 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC11.28□□□□□ -0.6
Atf6F6VAN0 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Atf6F6VAN0 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.28□□□□□ -0.6
Atf6F6VAN0 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atf6F6VAN0 Gm45165-201ENSMUST00000207763 1631 ntBASIC11.27□□□□□ -0.6
Atf6F6VAN0 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Atf6F6VAN0 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Atf6F6VAN0 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Atf6F6VAN0 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.27□□□□□ -0.61
Atf6F6VAN0 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atf6F6VAN0 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Atf6F6VAN0 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atf6F6VAN0 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atf6F6VAN0 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC11.27□□□□□ -0.61
Atf6F6VAN0 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC11.27□□□□□ -0.61
Atf6F6VAN0 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Atf6F6VAN0 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.27□□□□□ -0.61
Atf6F6VAN0 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Atf6F6VAN0 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.27□□□□□ -0.61
Atf6F6VAN0 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Atf6F6VAN0 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Atf6F6VAN0 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Atf6F6VAN0 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.27□□□□□ -0.61
Atf6F6VAN0 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC11.27□□□□□ -0.61
Atf6F6VAN0 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.27□□□□□ -0.61
Atf6F6VAN0 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.27□□□□□ -0.61
Atf6F6VAN0 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Atf6F6VAN0 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Atf6F6VAN0 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms