Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Clrn2B2RVW2 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC12.68□□□□□ -0.38
Clrn2B2RVW2 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn2B2RVW2 Gm38349-201ENSMUST00000195732 462 ntBASIC12.68□□□□□ -0.38
Clrn2B2RVW2 Gm3527-201ENSMUST00000198905 460 ntBASIC12.68□□□□□ -0.38
Clrn2B2RVW2 Gm30055-201ENSMUST00000203175 803 ntBASIC12.68□□□□□ -0.38
Clrn2B2RVW2 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn2B2RVW2 Gm18123-201ENSMUST00000210874 822 ntBASIC12.68□□□□□ -0.38
Clrn2B2RVW2 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn2B2RVW2 AC155300.1-201ENSMUST00000219134 480 ntBASIC12.68□□□□□ -0.38
Clrn2B2RVW2 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.68□□□□□ -0.38
Clrn2B2RVW2 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC12.68□□□□□ -0.38
Clrn2B2RVW2 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn2B2RVW2 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Clrn2B2RVW2 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.68□□□□□ -0.38
Clrn2B2RVW2 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Clrn2B2RVW2 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn2B2RVW2 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn2B2RVW2 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.68□□□□□ -0.38
Clrn2B2RVW2 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn2B2RVW2 AC153524.2-202ENSMUST00000220401 1794 ntBASIC12.68□□□□□ -0.38
Clrn2B2RVW2 Gm8684-201ENSMUST00000195078 1564 ntBASIC12.68□□□□□ -0.38
Clrn2B2RVW2 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn2B2RVW2 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn2B2RVW2 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC12.68□□□□□ -0.38
Clrn2B2RVW2 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn2B2RVW2 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Clrn2B2RVW2 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Clrn2B2RVW2 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Gfra2-203ENSMUST00000227697 1323 ntBASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Gm14034-201ENSMUST00000120147 551 ntBASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Gm24943-201ENSMUST00000158329 433 ntBASIC12.67□□□□□ -0.38
Clrn2B2RVW2 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Gm4462-201ENSMUST00000166453 492 ntBASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Gm9574-201ENSMUST00000173127 845 ntBASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Mipep-ps-201ENSMUST00000177439 291 ntBASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Gm8756-201ENSMUST00000183250 929 ntBASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Gm40414-201ENSMUST00000197608 481 ntBASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 AC154585.1-201ENSMUST00000218917 997 ntBASIC12.67□□□□□ -0.38
Clrn2B2RVW2 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clrn2B2RVW2 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clrn2B2RVW2 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms