Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col4a6B1AVK5 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Gm13758-201ENSMUST00000118699 743 ntBASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Gm12489-201ENSMUST00000119364 148 ntBASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Gm22763-201ENSMUST00000158374 107 ntBASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Gm25694-201ENSMUST00000175448 282 ntBASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Gm23521-201ENSMUST00000177845 110 ntBASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Col4a6B1AVK5 B130024G19Rik-204ENSMUST00000191084 634 ntTSL 5 BASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Gm42908-201ENSMUST00000197508 870 ntBASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Krtap6-3-201ENSMUST00000079151 444 ntBASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Gm26440-201ENSMUST00000082591 129 ntBASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Gm42449-201ENSMUST00000200349 2258 ntBASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Col4a6B1AVK5 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Gm7061-201ENSMUST00000118127 1416 ntBASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Babam2-202ENSMUST00000071531 1308 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Gm11771-201ENSMUST00000118124 732 ntBASIC11.06□□□□□ -0.64
Col4a6B1AVK5 1700010K24Rik-201ENSMUST00000125852 226 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Gm13799-201ENSMUST00000138883 838 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 1700028K03Rik-202ENSMUST00000159902 742 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Gm38145-201ENSMUST00000192319 693 ntBASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Gm32098-201ENSMUST00000211305 479 ntTSL 5 BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Gm34983-202ENSMUST00000220432 494 ntTSL 3 BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Cxcl3-201ENSMUST00000031326 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 AC130671.3-201ENSMUST00000227393 1897 ntBASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Gm37145-201ENSMUST00000193540 2756 ntBASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Gm38227-201ENSMUST00000193036 1602 ntBASIC11.06□□□□□ -0.64
Col4a6B1AVK5 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Psmf1-202ENSMUST00000109869 1384 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Tomm5-203ENSMUST00000107809 738 ntTSL 3 BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Gm3880-201ENSMUST00000122154 337 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Gm15587-202ENSMUST00000156403 709 ntTSL 5 BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Gm23081-201ENSMUST00000157845 297 ntBASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 AC161581.1-201ENSMUST00000228696 318 ntBASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Col4a6B1AVK5 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms