Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Speer3W4VSP1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Speer3W4VSP1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Speer3W4VSP1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Speer3W4VSP1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Speer3W4VSP1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Speer3W4VSP1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Speer3W4VSP1 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Speer3W4VSP1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Speer3W4VSP1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.32■□□□□ 0.84
Speer3W4VSP1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Speer3W4VSP1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Speer3W4VSP1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Speer3W4VSP1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Speer3W4VSP1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Speer3W4VSP1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Speer3W4VSP1 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Speer3W4VSP1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Speer3W4VSP1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Speer3W4VSP1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Speer3W4VSP1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Speer3W4VSP1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Speer3W4VSP1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Speer3W4VSP1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Speer3W4VSP1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Speer3W4VSP1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Speer3W4VSP1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Speer3W4VSP1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.3■□□□□ 0.84
Speer3W4VSP1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.3■□□□□ 0.84
Speer3W4VSP1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Speer3W4VSP1 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Speer3W4VSP1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Speer3W4VSP1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Speer3W4VSP1 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Speer3W4VSP1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Speer3W4VSP1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.29■□□□□ 0.84
Speer3W4VSP1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Speer3W4VSP1 Gm15820-201ENSMUST00000201566 728 ntBASIC20.29■□□□□ 0.84
Speer3W4VSP1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Speer3W4VSP1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Speer3W4VSP1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Speer3W4VSP1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Speer3W4VSP1 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Speer3W4VSP1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.28■□□□□ 0.84
Speer3W4VSP1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Speer3W4VSP1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Speer3W4VSP1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Speer3W4VSP1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Speer3W4VSP1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Speer3W4VSP1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Speer3W4VSP1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Speer3W4VSP1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Speer3W4VSP1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Speer3W4VSP1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Speer3W4VSP1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Speer3W4VSP1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Speer3W4VSP1 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Speer3W4VSP1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Speer3W4VSP1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Speer3W4VSP1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Speer3W4VSP1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Speer3W4VSP1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Speer3W4VSP1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Speer3W4VSP1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.26■□□□□ 0.83
Speer3W4VSP1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Speer3W4VSP1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Speer3W4VSP1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Speer3W4VSP1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Speer3W4VSP1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Speer3W4VSP1 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Speer3W4VSP1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Speer3W4VSP1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
Speer3W4VSP1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.25■□□□□ 0.83
Speer3W4VSP1 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.25■□□□□ 0.83
Speer3W4VSP1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Speer3W4VSP1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Speer3W4VSP1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Speer3W4VSP1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Speer3W4VSP1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Speer3W4VSP1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Speer3W4VSP1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.24■□□□□ 0.83
Speer3W4VSP1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.24■□□□□ 0.83
Speer3W4VSP1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Speer3W4VSP1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Speer3W4VSP1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Speer3W4VSP1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Speer3W4VSP1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Speer3W4VSP1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.24■□□□□ 0.83
Speer3W4VSP1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.23■□□□□ 0.83
Speer3W4VSP1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Speer3W4VSP1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Speer3W4VSP1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Speer3W4VSP1 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Speer3W4VSP1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Speer3W4VSP1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Speer3W4VSP1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Speer3W4VSP1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Speer3W4VSP1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.22■□□□□ 0.83
Speer3W4VSP1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Speer3W4VSP1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms