Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm9870-201ENSMUST00000063874 645 ntBASIC19.38■□□□□ 0.69
Cldn9Q9Z0S7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn9Q9Z0S7 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cldn9Q9Z0S7 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Cldn9Q9Z0S7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn9Q9Z0S7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.37■□□□□ 0.69
Cldn9Q9Z0S7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn9Q9Z0S7 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.37■□□□□ 0.69
Cldn9Q9Z0S7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn9Q9Z0S7 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn9Q9Z0S7 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.37■□□□□ 0.69
Cldn9Q9Z0S7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.37■□□□□ 0.69
Cldn9Q9Z0S7 Gm9959-201ENSMUST00000068277 390 ntBASIC19.37■□□□□ 0.69
Cldn9Q9Z0S7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn9Q9Z0S7 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn9Q9Z0S7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cldn9Q9Z0S7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn9Q9Z0S7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cldn9Q9Z0S7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn9Q9Z0S7 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.36■□□□□ 0.69
Cldn9Q9Z0S7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn9Q9Z0S7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn9Q9Z0S7 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cldn9Q9Z0S7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.35■□□□□ 0.69
Cldn9Q9Z0S7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cldn9Q9Z0S7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn9Q9Z0S7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn9Q9Z0S7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn9Q9Z0S7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn9Q9Z0S7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn9Q9Z0S7 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn9Q9Z0S7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cldn9Q9Z0S7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Cldn9Q9Z0S7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Cldn9Q9Z0S7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.34■□□□□ 0.69
Cldn9Q9Z0S7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.34■□□□□ 0.69
Cldn9Q9Z0S7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn9Q9Z0S7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn9Q9Z0S7 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn9Q9Z0S7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn9Q9Z0S7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn9Q9Z0S7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn9Q9Z0S7 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn9Q9Z0S7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cldn9Q9Z0S7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cldn9Q9Z0S7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.33■□□□□ 0.68
Cldn9Q9Z0S7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.33■□□□□ 0.68
Cldn9Q9Z0S7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.33■□□□□ 0.68
Cldn9Q9Z0S7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Cldn9Q9Z0S7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cldn9Q9Z0S7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn9Q9Z0S7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn9Q9Z0S7 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn9Q9Z0S7 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cldn9Q9Z0S7 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Cldn9Q9Z0S7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn9Q9Z0S7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.32■□□□□ 0.68
Cldn9Q9Z0S7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn9Q9Z0S7 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cldn9Q9Z0S7 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn9Q9Z0S7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn9Q9Z0S7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
Cldn9Q9Z0S7 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cldn9Q9Z0S7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn9Q9Z0S7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.31■□□□□ 0.68
Cldn9Q9Z0S7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Cldn9Q9Z0S7 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn9Q9Z0S7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn9Q9Z0S7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn9Q9Z0S7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn9Q9Z0S7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn9Q9Z0S7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn9Q9Z0S7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn9Q9Z0S7 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn9Q9Z0S7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn9Q9Z0S7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn9Q9Z0S7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
Cldn9Q9Z0S7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.29■□□□□ 0.68
Cldn9Q9Z0S7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.29■□□□□ 0.68
Cldn9Q9Z0S7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.29■□□□□ 0.68
Cldn9Q9Z0S7 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.29■□□□□ 0.68
Cldn9Q9Z0S7 Gm43530-201ENSMUST00000195920 274 ntBASIC19.29■□□□□ 0.68
Cldn9Q9Z0S7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.29■□□□□ 0.68
Cldn9Q9Z0S7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn9Q9Z0S7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn9Q9Z0S7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.29■□□□□ 0.68
Cldn9Q9Z0S7 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn9Q9Z0S7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn9Q9Z0S7 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn9Q9Z0S7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn9Q9Z0S7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn9Q9Z0S7 Gm22238-201ENSMUST00000175222 88 ntBASIC19.28■□□□□ 0.68
Cldn9Q9Z0S7 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn9Q9Z0S7 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.28■□□□□ 0.68
Cldn9Q9Z0S7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn9Q9Z0S7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn9Q9Z0S7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Cldn9Q9Z0S7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn9Q9Z0S7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn9Q9Z0S7 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms