Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
ClcnkaQ9WUB7 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
ClcnkaQ9WUB7 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ClcnkaQ9WUB7 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ClcnkaQ9WUB7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ClcnkaQ9WUB7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.47■□□□□ 0.55
ClcnkaQ9WUB7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ClcnkaQ9WUB7 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ClcnkaQ9WUB7 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.47■□□□□ 0.55
ClcnkaQ9WUB7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.47■□□□□ 0.55
ClcnkaQ9WUB7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.47■□□□□ 0.55
ClcnkaQ9WUB7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
ClcnkaQ9WUB7 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.47■□□□□ 0.55
ClcnkaQ9WUB7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ClcnkaQ9WUB7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ClcnkaQ9WUB7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ClcnkaQ9WUB7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ClcnkaQ9WUB7 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ClcnkaQ9WUB7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ClcnkaQ9WUB7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ClcnkaQ9WUB7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ClcnkaQ9WUB7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ClcnkaQ9WUB7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ClcnkaQ9WUB7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ClcnkaQ9WUB7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ClcnkaQ9WUB7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
ClcnkaQ9WUB7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
ClcnkaQ9WUB7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ClcnkaQ9WUB7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
ClcnkaQ9WUB7 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
ClcnkaQ9WUB7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ClcnkaQ9WUB7 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ClcnkaQ9WUB7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ClcnkaQ9WUB7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ClcnkaQ9WUB7 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ClcnkaQ9WUB7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ClcnkaQ9WUB7 Gm9870-201ENSMUST00000063874 645 ntBASIC18.45■□□□□ 0.54
ClcnkaQ9WUB7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.45■□□□□ 0.54
ClcnkaQ9WUB7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ClcnkaQ9WUB7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ClcnkaQ9WUB7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ClcnkaQ9WUB7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ClcnkaQ9WUB7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
ClcnkaQ9WUB7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.44■□□□□ 0.54
ClcnkaQ9WUB7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ClcnkaQ9WUB7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
ClcnkaQ9WUB7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
ClcnkaQ9WUB7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ClcnkaQ9WUB7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ClcnkaQ9WUB7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.44■□□□□ 0.54
ClcnkaQ9WUB7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
ClcnkaQ9WUB7 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.44■□□□□ 0.54
ClcnkaQ9WUB7 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ClcnkaQ9WUB7 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ClcnkaQ9WUB7 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ClcnkaQ9WUB7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ClcnkaQ9WUB7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
ClcnkaQ9WUB7 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ClcnkaQ9WUB7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.43■□□□□ 0.54
ClcnkaQ9WUB7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ClcnkaQ9WUB7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ClcnkaQ9WUB7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ClcnkaQ9WUB7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
ClcnkaQ9WUB7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ClcnkaQ9WUB7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ClcnkaQ9WUB7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ClcnkaQ9WUB7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.42■□□□□ 0.54
ClcnkaQ9WUB7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ClcnkaQ9WUB7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ClcnkaQ9WUB7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ClcnkaQ9WUB7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ClcnkaQ9WUB7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.42■□□□□ 0.54
ClcnkaQ9WUB7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
ClcnkaQ9WUB7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ClcnkaQ9WUB7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ClcnkaQ9WUB7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ClcnkaQ9WUB7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ClcnkaQ9WUB7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ClcnkaQ9WUB7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ClcnkaQ9WUB7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
ClcnkaQ9WUB7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ClcnkaQ9WUB7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.41■□□□□ 0.54
ClcnkaQ9WUB7 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.41■□□□□ 0.54
ClcnkaQ9WUB7 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
ClcnkaQ9WUB7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ClcnkaQ9WUB7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ClcnkaQ9WUB7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ClcnkaQ9WUB7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ClcnkaQ9WUB7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ClcnkaQ9WUB7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ClcnkaQ9WUB7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.41■□□□□ 0.54
ClcnkaQ9WUB7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ClcnkaQ9WUB7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ClcnkaQ9WUB7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ClcnkaQ9WUB7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
ClcnkaQ9WUB7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ClcnkaQ9WUB7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ClcnkaQ9WUB7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ClcnkaQ9WUB7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ClcnkaQ9WUB7 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms