Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn8aQ9WTU3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn8aQ9WTU3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn8aQ9WTU3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn8aQ9WTU3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn8aQ9WTU3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Scn8aQ9WTU3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn8aQ9WTU3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scn8aQ9WTU3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.5■□□□□ 0.87
Scn8aQ9WTU3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.5■□□□□ 0.87
Scn8aQ9WTU3 Mir6236-201ENSMUST00000184437 123 ntBASIC20.5■□□□□ 0.87
Scn8aQ9WTU3 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.5■□□□□ 0.87
Scn8aQ9WTU3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn8aQ9WTU3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scn8aQ9WTU3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Scn8aQ9WTU3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Scn8aQ9WTU3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn8aQ9WTU3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn8aQ9WTU3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn8aQ9WTU3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn8aQ9WTU3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Scn8aQ9WTU3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scn8aQ9WTU3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Scn8aQ9WTU3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Scn8aQ9WTU3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn8aQ9WTU3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Scn8aQ9WTU3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
Scn8aQ9WTU3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Scn8aQ9WTU3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.47■□□□□ 0.87
Scn8aQ9WTU3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Scn8aQ9WTU3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.46■□□□□ 0.87
Scn8aQ9WTU3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn8aQ9WTU3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn8aQ9WTU3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Scn8aQ9WTU3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
Scn8aQ9WTU3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn8aQ9WTU3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.46■□□□□ 0.87
Scn8aQ9WTU3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn8aQ9WTU3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.46■□□□□ 0.87
Scn8aQ9WTU3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Scn8aQ9WTU3 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Scn8aQ9WTU3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn8aQ9WTU3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn8aQ9WTU3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn8aQ9WTU3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn8aQ9WTU3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Scn8aQ9WTU3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Scn8aQ9WTU3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Scn8aQ9WTU3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Scn8aQ9WTU3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn8aQ9WTU3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn8aQ9WTU3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn8aQ9WTU3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn8aQ9WTU3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.44■□□□□ 0.86
Scn8aQ9WTU3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn8aQ9WTU3 Gm8493-201ENSMUST00000196881 489 ntBASIC20.44■□□□□ 0.86
Scn8aQ9WTU3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn8aQ9WTU3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Scn8aQ9WTU3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn8aQ9WTU3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn8aQ9WTU3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Scn8aQ9WTU3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn8aQ9WTU3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.43■□□□□ 0.86
Scn8aQ9WTU3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.43■□□□□ 0.86
Scn8aQ9WTU3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.43■□□□□ 0.86
Scn8aQ9WTU3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.43■□□□□ 0.86
Scn8aQ9WTU3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.42■□□□□ 0.86
Scn8aQ9WTU3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Scn8aQ9WTU3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn8aQ9WTU3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn8aQ9WTU3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Scn8aQ9WTU3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Scn8aQ9WTU3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
Scn8aQ9WTU3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scn8aQ9WTU3 Smad6-203ENSMUST00000179458 273 ntBASIC20.41■□□□□ 0.86
Scn8aQ9WTU3 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scn8aQ9WTU3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn8aQ9WTU3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.41■□□□□ 0.86
Scn8aQ9WTU3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn8aQ9WTU3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scn8aQ9WTU3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.41■□□□□ 0.86
Scn8aQ9WTU3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scn8aQ9WTU3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn8aQ9WTU3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Scn8aQ9WTU3 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.4■□□□□ 0.86
Scn8aQ9WTU3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Scn8aQ9WTU3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Scn8aQ9WTU3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Scn8aQ9WTU3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn8aQ9WTU3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn8aQ9WTU3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn8aQ9WTU3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Scn8aQ9WTU3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn8aQ9WTU3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.39■□□□□ 0.86
Scn8aQ9WTU3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scn8aQ9WTU3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scn8aQ9WTU3 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scn8aQ9WTU3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scn8aQ9WTU3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scn8aQ9WTU3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms