Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atp6ap1Q9R1Q9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Atp6ap1Q9R1Q9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Atp6ap1Q9R1Q9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atp6ap1Q9R1Q9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Atp6ap1Q9R1Q9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atp6ap1Q9R1Q9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Atp6ap1Q9R1Q9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atp6ap1Q9R1Q9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atp6ap1Q9R1Q9 Gm12922-201ENSMUST00000120626 809 ntBASIC19.68■□□□□ 0.74
Atp6ap1Q9R1Q9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atp6ap1Q9R1Q9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atp6ap1Q9R1Q9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Atp6ap1Q9R1Q9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atp6ap1Q9R1Q9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atp6ap1Q9R1Q9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atp6ap1Q9R1Q9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atp6ap1Q9R1Q9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atp6ap1Q9R1Q9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atp6ap1Q9R1Q9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.67■□□□□ 0.74
Atp6ap1Q9R1Q9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atp6ap1Q9R1Q9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atp6ap1Q9R1Q9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atp6ap1Q9R1Q9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Atp6ap1Q9R1Q9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atp6ap1Q9R1Q9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Atp6ap1Q9R1Q9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Atp6ap1Q9R1Q9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Atp6ap1Q9R1Q9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Atp6ap1Q9R1Q9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.66■□□□□ 0.74
Atp6ap1Q9R1Q9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.66■□□□□ 0.74
Atp6ap1Q9R1Q9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.66■□□□□ 0.74
Atp6ap1Q9R1Q9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atp6ap1Q9R1Q9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atp6ap1Q9R1Q9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atp6ap1Q9R1Q9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Atp6ap1Q9R1Q9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Atp6ap1Q9R1Q9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atp6ap1Q9R1Q9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atp6ap1Q9R1Q9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.65■□□□□ 0.74
Atp6ap1Q9R1Q9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atp6ap1Q9R1Q9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Atp6ap1Q9R1Q9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atp6ap1Q9R1Q9 Golgb1-201ENSMUST00000023534 498 ntBASIC19.65■□□□□ 0.74
Atp6ap1Q9R1Q9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atp6ap1Q9R1Q9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atp6ap1Q9R1Q9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atp6ap1Q9R1Q9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Atp6ap1Q9R1Q9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Atp6ap1Q9R1Q9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Atp6ap1Q9R1Q9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Atp6ap1Q9R1Q9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Atp6ap1Q9R1Q9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atp6ap1Q9R1Q9 Gm9847-201ENSMUST00000052528 599 ntBASIC19.64■□□□□ 0.73
Atp6ap1Q9R1Q9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.64■□□□□ 0.73
Atp6ap1Q9R1Q9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atp6ap1Q9R1Q9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atp6ap1Q9R1Q9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atp6ap1Q9R1Q9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Atp6ap1Q9R1Q9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atp6ap1Q9R1Q9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atp6ap1Q9R1Q9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atp6ap1Q9R1Q9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atp6ap1Q9R1Q9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp6ap1Q9R1Q9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp6ap1Q9R1Q9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Atp6ap1Q9R1Q9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp6ap1Q9R1Q9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp6ap1Q9R1Q9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Atp6ap1Q9R1Q9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.63■□□□□ 0.73
Atp6ap1Q9R1Q9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Atp6ap1Q9R1Q9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Atp6ap1Q9R1Q9 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp6ap1Q9R1Q9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atp6ap1Q9R1Q9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Atp6ap1Q9R1Q9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atp6ap1Q9R1Q9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atp6ap1Q9R1Q9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atp6ap1Q9R1Q9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atp6ap1Q9R1Q9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atp6ap1Q9R1Q9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atp6ap1Q9R1Q9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atp6ap1Q9R1Q9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.62■□□□□ 0.73
Atp6ap1Q9R1Q9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Atp6ap1Q9R1Q9 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atp6ap1Q9R1Q9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atp6ap1Q9R1Q9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Atp6ap1Q9R1Q9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Atp6ap1Q9R1Q9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.61■□□□□ 0.73
Atp6ap1Q9R1Q9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Atp6ap1Q9R1Q9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Atp6ap1Q9R1Q9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atp6ap1Q9R1Q9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.6■□□□□ 0.73
Atp6ap1Q9R1Q9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atp6ap1Q9R1Q9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Atp6ap1Q9R1Q9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Atp6ap1Q9R1Q9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atp6ap1Q9R1Q9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Atp6ap1Q9R1Q9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Atp6ap1Q9R1Q9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms