Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tubd1Q9R1K7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tubd1Q9R1K7 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tubd1Q9R1K7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tubd1Q9R1K7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.6■□□□□ 0.89
Tubd1Q9R1K7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tubd1Q9R1K7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tubd1Q9R1K7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.6■□□□□ 0.89
Tubd1Q9R1K7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tubd1Q9R1K7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Tubd1Q9R1K7 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tubd1Q9R1K7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.59■□□□□ 0.89
Tubd1Q9R1K7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tubd1Q9R1K7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tubd1Q9R1K7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tubd1Q9R1K7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tubd1Q9R1K7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Tubd1Q9R1K7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Tubd1Q9R1K7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.58■□□□□ 0.89
Tubd1Q9R1K7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tubd1Q9R1K7 Gm21956-201ENSMUST00000179946 522 ntBASIC20.58■□□□□ 0.89
Tubd1Q9R1K7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.58■□□□□ 0.89
Tubd1Q9R1K7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tubd1Q9R1K7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tubd1Q9R1K7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tubd1Q9R1K7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tubd1Q9R1K7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tubd1Q9R1K7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Tubd1Q9R1K7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tubd1Q9R1K7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.57■□□□□ 0.88
Tubd1Q9R1K7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tubd1Q9R1K7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tubd1Q9R1K7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.57■□□□□ 0.88
Tubd1Q9R1K7 Gm13241-201ENSMUST00000094493 780 ntBASIC20.57■□□□□ 0.88
Tubd1Q9R1K7 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tubd1Q9R1K7 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tubd1Q9R1K7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tubd1Q9R1K7 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.56■□□□□ 0.88
Tubd1Q9R1K7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tubd1Q9R1K7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tubd1Q9R1K7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tubd1Q9R1K7 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.56■□□□□ 0.88
Tubd1Q9R1K7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tubd1Q9R1K7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tubd1Q9R1K7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tubd1Q9R1K7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.56■□□□□ 0.88
Tubd1Q9R1K7 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.56■□□□□ 0.88
Tubd1Q9R1K7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tubd1Q9R1K7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tubd1Q9R1K7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tubd1Q9R1K7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tubd1Q9R1K7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tubd1Q9R1K7 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tubd1Q9R1K7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tubd1Q9R1K7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tubd1Q9R1K7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tubd1Q9R1K7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Tubd1Q9R1K7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.55■□□□□ 0.88
Tubd1Q9R1K7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tubd1Q9R1K7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tubd1Q9R1K7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Tubd1Q9R1K7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.55■□□□□ 0.88
Tubd1Q9R1K7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.55■□□□□ 0.88
Tubd1Q9R1K7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tubd1Q9R1K7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
Tubd1Q9R1K7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tubd1Q9R1K7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tubd1Q9R1K7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tubd1Q9R1K7 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Tubd1Q9R1K7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.54■□□□□ 0.88
Tubd1Q9R1K7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tubd1Q9R1K7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.54■□□□□ 0.88
Tubd1Q9R1K7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tubd1Q9R1K7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tubd1Q9R1K7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.54■□□□□ 0.88
Tubd1Q9R1K7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tubd1Q9R1K7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Tubd1Q9R1K7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tubd1Q9R1K7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.53■□□□□ 0.88
Tubd1Q9R1K7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tubd1Q9R1K7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.53■□□□□ 0.88
Tubd1Q9R1K7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Tubd1Q9R1K7 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tubd1Q9R1K7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tubd1Q9R1K7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tubd1Q9R1K7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.53■□□□□ 0.88
Tubd1Q9R1K7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tubd1Q9R1K7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tubd1Q9R1K7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tubd1Q9R1K7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tubd1Q9R1K7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.52■□□□□ 0.88
Tubd1Q9R1K7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Tubd1Q9R1K7 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tubd1Q9R1K7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tubd1Q9R1K7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tubd1Q9R1K7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tubd1Q9R1K7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tubd1Q9R1K7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Tubd1Q9R1K7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tubd1Q9R1K7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms