Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdh17Q9R100 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdh17Q9R100 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdh17Q9R100 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdh17Q9R100 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cdh17Q9R100 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cdh17Q9R100 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdh17Q9R100 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdh17Q9R100 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdh17Q9R100 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdh17Q9R100 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.66■□□□□ 0.74
Cdh17Q9R100 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cdh17Q9R100 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh17Q9R100 Golph3-202ENSMUST00000226517 2359 ntBASIC19.65■□□□□ 0.74
Cdh17Q9R100 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh17Q9R100 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh17Q9R100 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh17Q9R100 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cdh17Q9R100 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.65■□□□□ 0.74
Cdh17Q9R100 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cdh17Q9R100 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Cdh17Q9R100 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh17Q9R100 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh17Q9R100 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cdh17Q9R100 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Cdh17Q9R100 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Cdh17Q9R100 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Cdh17Q9R100 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Cdh17Q9R100 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cdh17Q9R100 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdh17Q9R100 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdh17Q9R100 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cdh17Q9R100 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Cdh17Q9R100 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Cdh17Q9R100 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh17Q9R100 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh17Q9R100 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh17Q9R100 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh17Q9R100 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh17Q9R100 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh17Q9R100 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh17Q9R100 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cdh17Q9R100 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdh17Q9R100 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdh17Q9R100 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Cdh17Q9R100 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdh17Q9R100 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdh17Q9R100 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Cdh17Q9R100 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Cdh17Q9R100 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Cdh17Q9R100 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Cdh17Q9R100 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cdh17Q9R100 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.62■□□□□ 0.73
Cdh17Q9R100 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh17Q9R100 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Cdh17Q9R100 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh17Q9R100 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.61■□□□□ 0.73
Cdh17Q9R100 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Cdh17Q9R100 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh17Q9R100 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh17Q9R100 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh17Q9R100 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh17Q9R100 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh17Q9R100 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh17Q9R100 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cdh17Q9R100 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cdh17Q9R100 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Cdh17Q9R100 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdh17Q9R100 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.6■□□□□ 0.73
Cdh17Q9R100 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cdh17Q9R100 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cdh17Q9R100 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.59■□□□□ 0.73
Cdh17Q9R100 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdh17Q9R100 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.59■□□□□ 0.73
Cdh17Q9R100 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Cdh17Q9R100 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdh17Q9R100 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cdh17Q9R100 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdh17Q9R100 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cdh17Q9R100 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.58■□□□□ 0.73
Cdh17Q9R100 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Cdh17Q9R100 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Cdh17Q9R100 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdh17Q9R100 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.58■□□□□ 0.72
Cdh17Q9R100 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.58■□□□□ 0.72
Cdh17Q9R100 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.58■□□□□ 0.72
Cdh17Q9R100 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdh17Q9R100 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdh17Q9R100 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdh17Q9R100 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.58■□□□□ 0.72
Cdh17Q9R100 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdh17Q9R100 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Cdh17Q9R100 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cdh17Q9R100 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.57■□□□□ 0.72
Cdh17Q9R100 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cdh17Q9R100 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdh17Q9R100 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
Cdh17Q9R100 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cdh17Q9R100 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Cdh17Q9R100 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms