Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rbfox1Q9JJ43 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rbfox1Q9JJ43 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rbfox1Q9JJ43 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.12■□□□□ 0.33
Rbfox1Q9JJ43 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rbfox1Q9JJ43 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rbfox1Q9JJ43 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rbfox1Q9JJ43 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rbfox1Q9JJ43 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rbfox1Q9JJ43 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rbfox1Q9JJ43 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
Rbfox1Q9JJ43 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rbfox1Q9JJ43 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rbfox1Q9JJ43 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rbfox1Q9JJ43 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rbfox1Q9JJ43 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rbfox1Q9JJ43 Golph3-202ENSMUST00000226517 2359 ntBASIC17.11■□□□□ 0.33
Rbfox1Q9JJ43 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Rbfox1Q9JJ43 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rbfox1Q9JJ43 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rbfox1Q9JJ43 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rbfox1Q9JJ43 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rbfox1Q9JJ43 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rbfox1Q9JJ43 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rbfox1Q9JJ43 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rbfox1Q9JJ43 Gm13238-201ENSMUST00000117655 780 ntBASIC17.1■□□□□ 0.33
Rbfox1Q9JJ43 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rbfox1Q9JJ43 Gm7143-201ENSMUST00000222811 859 ntBASIC17.1■□□□□ 0.33
Rbfox1Q9JJ43 Gm10232-201ENSMUST00000089221 720 ntBASIC17.1■□□□□ 0.33
Rbfox1Q9JJ43 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rbfox1Q9JJ43 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rbfox1Q9JJ43 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rbfox1Q9JJ43 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rbfox1Q9JJ43 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rbfox1Q9JJ43 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Rbfox1Q9JJ43 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rbfox1Q9JJ43 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.09■□□□□ 0.33
Rbfox1Q9JJ43 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rbfox1Q9JJ43 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rbfox1Q9JJ43 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.08■□□□□ 0.32
Rbfox1Q9JJ43 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rbfox1Q9JJ43 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rbfox1Q9JJ43 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rbfox1Q9JJ43 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rbfox1Q9JJ43 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rbfox1Q9JJ43 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rbfox1Q9JJ43 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rbfox1Q9JJ43 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rbfox1Q9JJ43 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rbfox1Q9JJ43 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rbfox1Q9JJ43 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.07■□□□□ 0.32
Rbfox1Q9JJ43 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rbfox1Q9JJ43 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rbfox1Q9JJ43 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rbfox1Q9JJ43 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rbfox1Q9JJ43 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rbfox1Q9JJ43 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rbfox1Q9JJ43 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rbfox1Q9JJ43 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rbfox1Q9JJ43 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rbfox1Q9JJ43 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rbfox1Q9JJ43 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rbfox1Q9JJ43 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rbfox1Q9JJ43 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rbfox1Q9JJ43 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rbfox1Q9JJ43 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rbfox1Q9JJ43 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rbfox1Q9JJ43 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rbfox1Q9JJ43 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rbfox1Q9JJ43 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rbfox1Q9JJ43 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rbfox1Q9JJ43 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rbfox1Q9JJ43 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.05■□□□□ 0.32
Rbfox1Q9JJ43 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rbfox1Q9JJ43 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.05■□□□□ 0.32
Rbfox1Q9JJ43 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rbfox1Q9JJ43 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rbfox1Q9JJ43 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rbfox1Q9JJ43 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rbfox1Q9JJ43 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Rbfox1Q9JJ43 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rbfox1Q9JJ43 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rbfox1Q9JJ43 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rbfox1Q9JJ43 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.03■□□□□ 0.32
Rbfox1Q9JJ43 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rbfox1Q9JJ43 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rbfox1Q9JJ43 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.03■□□□□ 0.32
Rbfox1Q9JJ43 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rbfox1Q9JJ43 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rbfox1Q9JJ43 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rbfox1Q9JJ43 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rbfox1Q9JJ43 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Rbfox1Q9JJ43 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rbfox1Q9JJ43 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.03■□□□□ 0.32
Rbfox1Q9JJ43 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rbfox1Q9JJ43 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rbfox1Q9JJ43 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rbfox1Q9JJ43 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Rbfox1Q9JJ43 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rbfox1Q9JJ43 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms