Protein–RNA interactions for Protein: Q9DA19

Cir1, Corepressor interacting with RBPJ 1, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cir1Q9DA19 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cir1Q9DA19 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cir1Q9DA19 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cir1Q9DA19 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cir1Q9DA19 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cir1Q9DA19 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cir1Q9DA19 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Cir1Q9DA19 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cir1Q9DA19 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cir1Q9DA19 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cir1Q9DA19 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cir1Q9DA19 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cir1Q9DA19 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cir1Q9DA19 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cir1Q9DA19 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cir1Q9DA19 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cir1Q9DA19 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
Cir1Q9DA19 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cir1Q9DA19 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cir1Q9DA19 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cir1Q9DA19 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cir1Q9DA19 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.31■□□□□ 0.36
Cir1Q9DA19 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cir1Q9DA19 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cir1Q9DA19 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cir1Q9DA19 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.31■□□□□ 0.36
Cir1Q9DA19 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cir1Q9DA19 Gm9959-201ENSMUST00000068277 390 ntBASIC17.31■□□□□ 0.36
Cir1Q9DA19 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cir1Q9DA19 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cir1Q9DA19 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cir1Q9DA19 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.3■□□□□ 0.36
Cir1Q9DA19 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cir1Q9DA19 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cir1Q9DA19 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Cir1Q9DA19 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cir1Q9DA19 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cir1Q9DA19 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cir1Q9DA19 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cir1Q9DA19 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cir1Q9DA19 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cir1Q9DA19 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cir1Q9DA19 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cir1Q9DA19 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cir1Q9DA19 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cir1Q9DA19 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cir1Q9DA19 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Cir1Q9DA19 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cir1Q9DA19 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.29■□□□□ 0.36
Cir1Q9DA19 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cir1Q9DA19 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cir1Q9DA19 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
Cir1Q9DA19 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cir1Q9DA19 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cir1Q9DA19 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cir1Q9DA19 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cir1Q9DA19 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Cir1Q9DA19 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cir1Q9DA19 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cir1Q9DA19 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.28■□□□□ 0.36
Cir1Q9DA19 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cir1Q9DA19 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cir1Q9DA19 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cir1Q9DA19 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cir1Q9DA19 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cir1Q9DA19 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cir1Q9DA19 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cir1Q9DA19 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Cir1Q9DA19 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.27■□□□□ 0.36
Cir1Q9DA19 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.27■□□□□ 0.36
Cir1Q9DA19 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Cir1Q9DA19 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cir1Q9DA19 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cir1Q9DA19 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cir1Q9DA19 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cir1Q9DA19 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Cir1Q9DA19 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cir1Q9DA19 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cir1Q9DA19 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cir1Q9DA19 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cir1Q9DA19 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cir1Q9DA19 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cir1Q9DA19 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cir1Q9DA19 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cir1Q9DA19 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cir1Q9DA19 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.26■□□□□ 0.35
Cir1Q9DA19 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cir1Q9DA19 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cir1Q9DA19 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cir1Q9DA19 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cir1Q9DA19 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cir1Q9DA19 Gm10232-201ENSMUST00000089221 720 ntBASIC17.26■□□□□ 0.35
Cir1Q9DA19 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.26■□□□□ 0.35
Cir1Q9DA19 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cir1Q9DA19 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cir1Q9DA19 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.25■□□□□ 0.35
Cir1Q9DA19 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cir1Q9DA19 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cir1Q9DA19 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cir1Q9DA19 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms