Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rsph9Q9D9V4 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rsph9Q9D9V4 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rsph9Q9D9V4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rsph9Q9D9V4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Rsph9Q9D9V4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rsph9Q9D9V4 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rsph9Q9D9V4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rsph9Q9D9V4 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.7■□□□□ 0.74
Rsph9Q9D9V4 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Rsph9Q9D9V4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rsph9Q9D9V4 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rsph9Q9D9V4 Gm43017-201ENSMUST00000198296 752 ntBASIC19.7■□□□□ 0.74
Rsph9Q9D9V4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.7■□□□□ 0.74
Rsph9Q9D9V4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rsph9Q9D9V4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rsph9Q9D9V4 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rsph9Q9D9V4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rsph9Q9D9V4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rsph9Q9D9V4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rsph9Q9D9V4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rsph9Q9D9V4 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.69■□□□□ 0.74
Rsph9Q9D9V4 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Rsph9Q9D9V4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rsph9Q9D9V4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rsph9Q9D9V4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rsph9Q9D9V4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rsph9Q9D9V4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rsph9Q9D9V4 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rsph9Q9D9V4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rsph9Q9D9V4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rsph9Q9D9V4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
Rsph9Q9D9V4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.68■□□□□ 0.74
Rsph9Q9D9V4 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rsph9Q9D9V4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rsph9Q9D9V4 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rsph9Q9D9V4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rsph9Q9D9V4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rsph9Q9D9V4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.67■□□□□ 0.74
Rsph9Q9D9V4 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rsph9Q9D9V4 Gm12251-201ENSMUST00000117893 792 ntBASIC19.67■□□□□ 0.74
Rsph9Q9D9V4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.67■□□□□ 0.74
Rsph9Q9D9V4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.67■□□□□ 0.74
Rsph9Q9D9V4 Gm43173-201ENSMUST00000202246 593 ntBASIC19.67■□□□□ 0.74
Rsph9Q9D9V4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rsph9Q9D9V4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rsph9Q9D9V4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rsph9Q9D9V4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Rsph9Q9D9V4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rsph9Q9D9V4 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rsph9Q9D9V4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rsph9Q9D9V4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rsph9Q9D9V4 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rsph9Q9D9V4 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rsph9Q9D9V4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rsph9Q9D9V4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rsph9Q9D9V4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rsph9Q9D9V4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rsph9Q9D9V4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.66■□□□□ 0.74
Rsph9Q9D9V4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rsph9Q9D9V4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Rsph9Q9D9V4 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.65■□□□□ 0.74
Rsph9Q9D9V4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.65■□□□□ 0.74
Rsph9Q9D9V4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rsph9Q9D9V4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rsph9Q9D9V4 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rsph9Q9D9V4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rsph9Q9D9V4 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.65■□□□□ 0.74
Rsph9Q9D9V4 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.65■□□□□ 0.74
Rsph9Q9D9V4 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rsph9Q9D9V4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rsph9Q9D9V4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rsph9Q9D9V4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rsph9Q9D9V4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Rsph9Q9D9V4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rsph9Q9D9V4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rsph9Q9D9V4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rsph9Q9D9V4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rsph9Q9D9V4 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Rsph9Q9D9V4 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rsph9Q9D9V4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rsph9Q9D9V4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rsph9Q9D9V4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rsph9Q9D9V4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rsph9Q9D9V4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rsph9Q9D9V4 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.63■□□□□ 0.73
Rsph9Q9D9V4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.63■□□□□ 0.73
Rsph9Q9D9V4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rsph9Q9D9V4 Spcs1-204ENSMUST00000226782 949 ntBASIC19.63■□□□□ 0.73
Rsph9Q9D9V4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rsph9Q9D9V4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rsph9Q9D9V4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
Rsph9Q9D9V4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Rsph9Q9D9V4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rsph9Q9D9V4 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rsph9Q9D9V4 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.62■□□□□ 0.73
Rsph9Q9D9V4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rsph9Q9D9V4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rsph9Q9D9V4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rsph9Q9D9V4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms