Protein–RNA interactions for Protein: Q9D8B4

Ndufa11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa11Q9D8B4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ndufa11Q9D8B4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ndufa11Q9D8B4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Ndufa11Q9D8B4 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.54■□□□□ 0.4
Ndufa11Q9D8B4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ndufa11Q9D8B4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ndufa11Q9D8B4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.54■□□□□ 0.4
Ndufa11Q9D8B4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ndufa11Q9D8B4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ndufa11Q9D8B4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ndufa11Q9D8B4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Ndufa11Q9D8B4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ndufa11Q9D8B4 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ndufa11Q9D8B4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ndufa11Q9D8B4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ndufa11Q9D8B4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ndufa11Q9D8B4 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ndufa11Q9D8B4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.52■□□□□ 0.4
Ndufa11Q9D8B4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ndufa11Q9D8B4 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ndufa11Q9D8B4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ndufa11Q9D8B4 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ndufa11Q9D8B4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.52■□□□□ 0.4
Ndufa11Q9D8B4 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ndufa11Q9D8B4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ndufa11Q9D8B4 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ndufa11Q9D8B4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ndufa11Q9D8B4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ndufa11Q9D8B4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Ndufa11Q9D8B4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ndufa11Q9D8B4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ndufa11Q9D8B4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ndufa11Q9D8B4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.51■□□□□ 0.39
Ndufa11Q9D8B4 Gm27801-201ENSMUST00000184174 223 ntBASIC17.51■□□□□ 0.39
Ndufa11Q9D8B4 Reep4-203ENSMUST00000226563 1444 ntBASIC17.51■□□□□ 0.39
Ndufa11Q9D8B4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ndufa11Q9D8B4 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ndufa11Q9D8B4 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.51■□□□□ 0.39
Ndufa11Q9D8B4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ndufa11Q9D8B4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ndufa11Q9D8B4 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ndufa11Q9D8B4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ndufa11Q9D8B4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ndufa11Q9D8B4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ndufa11Q9D8B4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ndufa11Q9D8B4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ndufa11Q9D8B4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ndufa11Q9D8B4 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.49■□□□□ 0.39
Ndufa11Q9D8B4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ndufa11Q9D8B4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ndufa11Q9D8B4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.49■□□□□ 0.39
Ndufa11Q9D8B4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ndufa11Q9D8B4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.49■□□□□ 0.39
Ndufa11Q9D8B4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ndufa11Q9D8B4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ndufa11Q9D8B4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ndufa11Q9D8B4 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Ndufa11Q9D8B4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ndufa11Q9D8B4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ndufa11Q9D8B4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ndufa11Q9D8B4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ndufa11Q9D8B4 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ndufa11Q9D8B4 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ndufa11Q9D8B4 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Ndufa11Q9D8B4 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ndufa11Q9D8B4 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.48■□□□□ 0.39
Ndufa11Q9D8B4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ndufa11Q9D8B4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ndufa11Q9D8B4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ndufa11Q9D8B4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.48■□□□□ 0.39
Ndufa11Q9D8B4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ndufa11Q9D8B4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ndufa11Q9D8B4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Ndufa11Q9D8B4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ndufa11Q9D8B4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Ndufa11Q9D8B4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ndufa11Q9D8B4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ndufa11Q9D8B4 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.47■□□□□ 0.39
Ndufa11Q9D8B4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.47■□□□□ 0.39
Ndufa11Q9D8B4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ndufa11Q9D8B4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.47■□□□□ 0.39
Ndufa11Q9D8B4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.47■□□□□ 0.39
Ndufa11Q9D8B4 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ndufa11Q9D8B4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.47■□□□□ 0.39
Ndufa11Q9D8B4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ndufa11Q9D8B4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ndufa11Q9D8B4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ndufa11Q9D8B4 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.46■□□□□ 0.39
Ndufa11Q9D8B4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ndufa11Q9D8B4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ndufa11Q9D8B4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ndufa11Q9D8B4 Gm7514-201ENSMUST00000209475 934 ntBASIC17.46■□□□□ 0.39
Ndufa11Q9D8B4 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ndufa11Q9D8B4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ndufa11Q9D8B4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ndufa11Q9D8B4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ndufa11Q9D8B4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ndufa11Q9D8B4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ndufa11Q9D8B4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ndufa11Q9D8B4 Gm12441-201ENSMUST00000121806 588 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms