Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Upk3bl1Q9D701 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upk3bl1Q9D701 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upk3bl1Q9D701 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upk3bl1Q9D701 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upk3bl1Q9D701 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.23■□□□□ 0.51
Upk3bl1Q9D701 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upk3bl1Q9D701 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
Upk3bl1Q9D701 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upk3bl1Q9D701 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Upk3bl1Q9D701 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Upk3bl1Q9D701 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.22■□□□□ 0.51
Upk3bl1Q9D701 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk3bl1Q9D701 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.22■□□□□ 0.51
Upk3bl1Q9D701 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk3bl1Q9D701 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk3bl1Q9D701 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Upk3bl1Q9D701 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk3bl1Q9D701 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk3bl1Q9D701 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk3bl1Q9D701 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk3bl1Q9D701 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk3bl1Q9D701 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Upk3bl1Q9D701 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
Upk3bl1Q9D701 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
Upk3bl1Q9D701 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Upk3bl1Q9D701 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upk3bl1Q9D701 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upk3bl1Q9D701 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upk3bl1Q9D701 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upk3bl1Q9D701 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upk3bl1Q9D701 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Upk3bl1Q9D701 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Upk3bl1Q9D701 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Upk3bl1Q9D701 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upk3bl1Q9D701 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upk3bl1Q9D701 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upk3bl1Q9D701 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Upk3bl1Q9D701 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upk3bl1Q9D701 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Upk3bl1Q9D701 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upk3bl1Q9D701 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upk3bl1Q9D701 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Upk3bl1Q9D701 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.2■□□□□ 0.5
Upk3bl1Q9D701 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upk3bl1Q9D701 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Upk3bl1Q9D701 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upk3bl1Q9D701 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Upk3bl1Q9D701 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Upk3bl1Q9D701 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.19■□□□□ 0.5
Upk3bl1Q9D701 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.19■□□□□ 0.5
Upk3bl1Q9D701 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Upk3bl1Q9D701 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Upk3bl1Q9D701 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Upk3bl1Q9D701 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Upk3bl1Q9D701 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Upk3bl1Q9D701 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.18■□□□□ 0.5
Upk3bl1Q9D701 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.18■□□□□ 0.5
Upk3bl1Q9D701 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Upk3bl1Q9D701 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Upk3bl1Q9D701 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.18■□□□□ 0.5
Upk3bl1Q9D701 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.18■□□□□ 0.5
Upk3bl1Q9D701 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Upk3bl1Q9D701 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Upk3bl1Q9D701 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Upk3bl1Q9D701 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.17■□□□□ 0.5
Upk3bl1Q9D701 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Upk3bl1Q9D701 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Upk3bl1Q9D701 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.17■□□□□ 0.5
Upk3bl1Q9D701 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Upk3bl1Q9D701 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Upk3bl1Q9D701 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Upk3bl1Q9D701 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upk3bl1Q9D701 Gm11599-201ENSMUST00000118720 878 ntBASIC18.16■□□□□ 0.5
Upk3bl1Q9D701 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.16■□□□□ 0.5
Upk3bl1Q9D701 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Upk3bl1Q9D701 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.16■□□□□ 0.5
Upk3bl1Q9D701 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upk3bl1Q9D701 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upk3bl1Q9D701 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Upk3bl1Q9D701 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Upk3bl1Q9D701 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk3bl1Q9D701 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk3bl1Q9D701 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk3bl1Q9D701 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk3bl1Q9D701 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Upk3bl1Q9D701 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.15■□□□□ 0.5
Upk3bl1Q9D701 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk3bl1Q9D701 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk3bl1Q9D701 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk3bl1Q9D701 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk3bl1Q9D701 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk3bl1Q9D701 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk3bl1Q9D701 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.15■□□□□ 0.5
Upk3bl1Q9D701 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Upk3bl1Q9D701 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Upk3bl1Q9D701 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Upk3bl1Q9D701 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Upk3bl1Q9D701 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Upk3bl1Q9D701 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms