Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Nop56Q9D6Z1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nop56Q9D6Z1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nop56Q9D6Z1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nop56Q9D6Z1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Nop56Q9D6Z1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nop56Q9D6Z1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.65■□□□□ 0.9
Nop56Q9D6Z1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nop56Q9D6Z1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nop56Q9D6Z1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nop56Q9D6Z1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Nop56Q9D6Z1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nop56Q9D6Z1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nop56Q9D6Z1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nop56Q9D6Z1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nop56Q9D6Z1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Nop56Q9D6Z1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nop56Q9D6Z1 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.64■□□□□ 0.89
Nop56Q9D6Z1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Nop56Q9D6Z1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Nop56Q9D6Z1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Nop56Q9D6Z1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Nop56Q9D6Z1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Nop56Q9D6Z1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nop56Q9D6Z1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nop56Q9D6Z1 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.63■□□□□ 0.89
Nop56Q9D6Z1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nop56Q9D6Z1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.63■□□□□ 0.89
Nop56Q9D6Z1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.63■□□□□ 0.89
Nop56Q9D6Z1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nop56Q9D6Z1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Nop56Q9D6Z1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.63■□□□□ 0.89
Nop56Q9D6Z1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Nop56Q9D6Z1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nop56Q9D6Z1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.62■□□□□ 0.89
Nop56Q9D6Z1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nop56Q9D6Z1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nop56Q9D6Z1 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nop56Q9D6Z1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.62■□□□□ 0.89
Nop56Q9D6Z1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nop56Q9D6Z1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nop56Q9D6Z1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nop56Q9D6Z1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nop56Q9D6Z1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Nop56Q9D6Z1 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nop56Q9D6Z1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nop56Q9D6Z1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.62■□□□□ 0.89
Nop56Q9D6Z1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nop56Q9D6Z1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.61■□□□□ 0.89
Nop56Q9D6Z1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nop56Q9D6Z1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nop56Q9D6Z1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Nop56Q9D6Z1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nop56Q9D6Z1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Nop56Q9D6Z1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nop56Q9D6Z1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Nop56Q9D6Z1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nop56Q9D6Z1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nop56Q9D6Z1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nop56Q9D6Z1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nop56Q9D6Z1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.6■□□□□ 0.89
Nop56Q9D6Z1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Nop56Q9D6Z1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.6■□□□□ 0.89
Nop56Q9D6Z1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nop56Q9D6Z1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nop56Q9D6Z1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nop56Q9D6Z1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.59■□□□□ 0.89
Nop56Q9D6Z1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nop56Q9D6Z1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nop56Q9D6Z1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nop56Q9D6Z1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Nop56Q9D6Z1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.59■□□□□ 0.89
Nop56Q9D6Z1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nop56Q9D6Z1 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nop56Q9D6Z1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Nop56Q9D6Z1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.59■□□□□ 0.89
Nop56Q9D6Z1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nop56Q9D6Z1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nop56Q9D6Z1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
Nop56Q9D6Z1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nop56Q9D6Z1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nop56Q9D6Z1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nop56Q9D6Z1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nop56Q9D6Z1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.58■□□□□ 0.89
Nop56Q9D6Z1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Nop56Q9D6Z1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nop56Q9D6Z1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nop56Q9D6Z1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nop56Q9D6Z1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nop56Q9D6Z1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nop56Q9D6Z1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nop56Q9D6Z1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nop56Q9D6Z1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nop56Q9D6Z1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nop56Q9D6Z1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nop56Q9D6Z1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nop56Q9D6Z1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nop56Q9D6Z1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nop56Q9D6Z1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nop56Q9D6Z1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms