Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtl8cQ9D6I0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtl8cQ9D6I0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtl8cQ9D6I0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtl8cQ9D6I0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtl8cQ9D6I0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtl8cQ9D6I0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtl8cQ9D6I0 Gm43530-201ENSMUST00000195920 274 ntBASIC17.97■□□□□ 0.47
Rtl8cQ9D6I0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtl8cQ9D6I0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.96■□□□□ 0.47
Rtl8cQ9D6I0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Rtl8cQ9D6I0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtl8cQ9D6I0 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.96■□□□□ 0.47
Rtl8cQ9D6I0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rtl8cQ9D6I0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rtl8cQ9D6I0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.96■□□□□ 0.47
Rtl8cQ9D6I0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtl8cQ9D6I0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtl8cQ9D6I0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtl8cQ9D6I0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtl8cQ9D6I0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtl8cQ9D6I0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtl8cQ9D6I0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtl8cQ9D6I0 Mir6236-201ENSMUST00000184437 123 ntBASIC17.95■□□□□ 0.46
Rtl8cQ9D6I0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.95■□□□□ 0.46
Rtl8cQ9D6I0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Rtl8cQ9D6I0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rtl8cQ9D6I0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtl8cQ9D6I0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtl8cQ9D6I0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtl8cQ9D6I0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Rtl8cQ9D6I0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rtl8cQ9D6I0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtl8cQ9D6I0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Rtl8cQ9D6I0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtl8cQ9D6I0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.94■□□□□ 0.46
Rtl8cQ9D6I0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtl8cQ9D6I0 Gm9959-201ENSMUST00000068277 390 ntBASIC17.94■□□□□ 0.46
Rtl8cQ9D6I0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtl8cQ9D6I0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtl8cQ9D6I0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rtl8cQ9D6I0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtl8cQ9D6I0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.93■□□□□ 0.46
Rtl8cQ9D6I0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtl8cQ9D6I0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtl8cQ9D6I0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtl8cQ9D6I0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rtl8cQ9D6I0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.93■□□□□ 0.46
Rtl8cQ9D6I0 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.93■□□□□ 0.46
Rtl8cQ9D6I0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.93■□□□□ 0.46
Rtl8cQ9D6I0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Rtl8cQ9D6I0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rtl8cQ9D6I0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Rtl8cQ9D6I0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtl8cQ9D6I0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtl8cQ9D6I0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtl8cQ9D6I0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtl8cQ9D6I0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtl8cQ9D6I0 Gm45102-201ENSMUST00000207427 857 ntBASIC17.92■□□□□ 0.46
Rtl8cQ9D6I0 Rps24-207ENSMUST00000224568 714 ntBASIC17.92■□□□□ 0.46
Rtl8cQ9D6I0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.92■□□□□ 0.46
Rtl8cQ9D6I0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtl8cQ9D6I0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtl8cQ9D6I0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtl8cQ9D6I0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rtl8cQ9D6I0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtl8cQ9D6I0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtl8cQ9D6I0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtl8cQ9D6I0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtl8cQ9D6I0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtl8cQ9D6I0 Gm22238-201ENSMUST00000175222 88 ntBASIC17.91■□□□□ 0.46
Rtl8cQ9D6I0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtl8cQ9D6I0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtl8cQ9D6I0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtl8cQ9D6I0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtl8cQ9D6I0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtl8cQ9D6I0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rtl8cQ9D6I0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtl8cQ9D6I0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rtl8cQ9D6I0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rtl8cQ9D6I0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.9■□□□□ 0.46
Rtl8cQ9D6I0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtl8cQ9D6I0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtl8cQ9D6I0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rtl8cQ9D6I0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Rtl8cQ9D6I0 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.9■□□□□ 0.46
Rtl8cQ9D6I0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtl8cQ9D6I0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtl8cQ9D6I0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
Rtl8cQ9D6I0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Rtl8cQ9D6I0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtl8cQ9D6I0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.89■□□□□ 0.45
Rtl8cQ9D6I0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Rtl8cQ9D6I0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.89■□□□□ 0.45
Rtl8cQ9D6I0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtl8cQ9D6I0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rtl8cQ9D6I0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rtl8cQ9D6I0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rtl8cQ9D6I0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rtl8cQ9D6I0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms