Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
5530400C23RikQ9D3I0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
5530400C23RikQ9D3I0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
5530400C23RikQ9D3I0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
5530400C23RikQ9D3I0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
5530400C23RikQ9D3I0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
5530400C23RikQ9D3I0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
5530400C23RikQ9D3I0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
5530400C23RikQ9D3I0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
5530400C23RikQ9D3I0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
5530400C23RikQ9D3I0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
5530400C23RikQ9D3I0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
5530400C23RikQ9D3I0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
5530400C23RikQ9D3I0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
5530400C23RikQ9D3I0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
5530400C23RikQ9D3I0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
5530400C23RikQ9D3I0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
5530400C23RikQ9D3I0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
5530400C23RikQ9D3I0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
5530400C23RikQ9D3I0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
5530400C23RikQ9D3I0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
5530400C23RikQ9D3I0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
5530400C23RikQ9D3I0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
5530400C23RikQ9D3I0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
5530400C23RikQ9D3I0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
5530400C23RikQ9D3I0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
5530400C23RikQ9D3I0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
5530400C23RikQ9D3I0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
5530400C23RikQ9D3I0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
5530400C23RikQ9D3I0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
5530400C23RikQ9D3I0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.69■□□□□ 0.74
5530400C23RikQ9D3I0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
5530400C23RikQ9D3I0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
5530400C23RikQ9D3I0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
5530400C23RikQ9D3I0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
5530400C23RikQ9D3I0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
5530400C23RikQ9D3I0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
5530400C23RikQ9D3I0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
5530400C23RikQ9D3I0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.68■□□□□ 0.74
5530400C23RikQ9D3I0 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.68■□□□□ 0.74
5530400C23RikQ9D3I0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
5530400C23RikQ9D3I0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
5530400C23RikQ9D3I0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
5530400C23RikQ9D3I0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
5530400C23RikQ9D3I0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.67■□□□□ 0.74
5530400C23RikQ9D3I0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
5530400C23RikQ9D3I0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.67■□□□□ 0.74
5530400C23RikQ9D3I0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
5530400C23RikQ9D3I0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.67■□□□□ 0.74
5530400C23RikQ9D3I0 Gm43530-201ENSMUST00000195920 274 ntBASIC19.67■□□□□ 0.74
5530400C23RikQ9D3I0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
5530400C23RikQ9D3I0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
5530400C23RikQ9D3I0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
5530400C23RikQ9D3I0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
5530400C23RikQ9D3I0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
5530400C23RikQ9D3I0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
5530400C23RikQ9D3I0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
5530400C23RikQ9D3I0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.66■□□□□ 0.74
5530400C23RikQ9D3I0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
5530400C23RikQ9D3I0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
5530400C23RikQ9D3I0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
5530400C23RikQ9D3I0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
5530400C23RikQ9D3I0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
5530400C23RikQ9D3I0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.64■□□□□ 0.74
5530400C23RikQ9D3I0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
5530400C23RikQ9D3I0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
5530400C23RikQ9D3I0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.64■□□□□ 0.73
5530400C23RikQ9D3I0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
5530400C23RikQ9D3I0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms