Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
5530400C23RikQ9D3I0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
5530400C23RikQ9D3I0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
5530400C23RikQ9D3I0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
5530400C23RikQ9D3I0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
5530400C23RikQ9D3I0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
5530400C23RikQ9D3I0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
5530400C23RikQ9D3I0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
5530400C23RikQ9D3I0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
5530400C23RikQ9D3I0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
5530400C23RikQ9D3I0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
5530400C23RikQ9D3I0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
5530400C23RikQ9D3I0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
5530400C23RikQ9D3I0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
5530400C23RikQ9D3I0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
5530400C23RikQ9D3I0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
5530400C23RikQ9D3I0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
5530400C23RikQ9D3I0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
5530400C23RikQ9D3I0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
5530400C23RikQ9D3I0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
5530400C23RikQ9D3I0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
5530400C23RikQ9D3I0 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
5530400C23RikQ9D3I0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
5530400C23RikQ9D3I0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
5530400C23RikQ9D3I0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
5530400C23RikQ9D3I0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
5530400C23RikQ9D3I0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
5530400C23RikQ9D3I0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
5530400C23RikQ9D3I0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
5530400C23RikQ9D3I0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
5530400C23RikQ9D3I0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
5530400C23RikQ9D3I0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.69■□□□□ 0.74
5530400C23RikQ9D3I0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
5530400C23RikQ9D3I0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
5530400C23RikQ9D3I0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
5530400C23RikQ9D3I0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
5530400C23RikQ9D3I0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
5530400C23RikQ9D3I0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
5530400C23RikQ9D3I0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
5530400C23RikQ9D3I0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.68■□□□□ 0.74
5530400C23RikQ9D3I0 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.68■□□□□ 0.74
5530400C23RikQ9D3I0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
5530400C23RikQ9D3I0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
5530400C23RikQ9D3I0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
5530400C23RikQ9D3I0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
5530400C23RikQ9D3I0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.67■□□□□ 0.74
5530400C23RikQ9D3I0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
5530400C23RikQ9D3I0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.67■□□□□ 0.74
5530400C23RikQ9D3I0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
5530400C23RikQ9D3I0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.67■□□□□ 0.74
5530400C23RikQ9D3I0 Gm43530-201ENSMUST00000195920 274 ntBASIC19.67■□□□□ 0.74
5530400C23RikQ9D3I0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
5530400C23RikQ9D3I0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
5530400C23RikQ9D3I0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
5530400C23RikQ9D3I0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
5530400C23RikQ9D3I0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
5530400C23RikQ9D3I0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
5530400C23RikQ9D3I0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
5530400C23RikQ9D3I0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.66■□□□□ 0.74
5530400C23RikQ9D3I0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
5530400C23RikQ9D3I0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
5530400C23RikQ9D3I0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
5530400C23RikQ9D3I0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
5530400C23RikQ9D3I0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
5530400C23RikQ9D3I0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
5530400C23RikQ9D3I0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.64■□□□□ 0.74
5530400C23RikQ9D3I0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
5530400C23RikQ9D3I0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
5530400C23RikQ9D3I0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.64■□□□□ 0.73
5530400C23RikQ9D3I0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
5530400C23RikQ9D3I0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms