Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm5786-201ENSMUST00000085368 882 ntBASIC18.54■□□□□ 0.56
Trim13Q9CYB0 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Trim13Q9CYB0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.54■□□□□ 0.56
Trim13Q9CYB0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim13Q9CYB0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trim13Q9CYB0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trim13Q9CYB0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim13Q9CYB0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.53■□□□□ 0.56
Trim13Q9CYB0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim13Q9CYB0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim13Q9CYB0 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Trim13Q9CYB0 Golph3-202ENSMUST00000226517 2359 ntBASIC18.53■□□□□ 0.56
Trim13Q9CYB0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim13Q9CYB0 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim13Q9CYB0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim13Q9CYB0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim13Q9CYB0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim13Q9CYB0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim13Q9CYB0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Trim13Q9CYB0 Gm7332-201ENSMUST00000118351 454 ntBASIC18.52■□□□□ 0.56
Trim13Q9CYB0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.52■□□□□ 0.56
Trim13Q9CYB0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.52■□□□□ 0.56
Trim13Q9CYB0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim13Q9CYB0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Trim13Q9CYB0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim13Q9CYB0 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim13Q9CYB0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim13Q9CYB0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Trim13Q9CYB0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.51■□□□□ 0.55
Trim13Q9CYB0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim13Q9CYB0 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim13Q9CYB0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim13Q9CYB0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim13Q9CYB0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Trim13Q9CYB0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.5■□□□□ 0.55
Trim13Q9CYB0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim13Q9CYB0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim13Q9CYB0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim13Q9CYB0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim13Q9CYB0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Trim13Q9CYB0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim13Q9CYB0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim13Q9CYB0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim13Q9CYB0 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trim13Q9CYB0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.49■□□□□ 0.55
Trim13Q9CYB0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Trim13Q9CYB0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim13Q9CYB0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim13Q9CYB0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.49■□□□□ 0.55
Trim13Q9CYB0 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim13Q9CYB0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim13Q9CYB0 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim13Q9CYB0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim13Q9CYB0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim13Q9CYB0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim13Q9CYB0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim13Q9CYB0 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim13Q9CYB0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim13Q9CYB0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.49■□□□□ 0.55
Trim13Q9CYB0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim13Q9CYB0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.49■□□□□ 0.55
Trim13Q9CYB0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim13Q9CYB0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim13Q9CYB0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim13Q9CYB0 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim13Q9CYB0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim13Q9CYB0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trim13Q9CYB0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim13Q9CYB0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trim13Q9CYB0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim13Q9CYB0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Trim13Q9CYB0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim13Q9CYB0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim13Q9CYB0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim13Q9CYB0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim13Q9CYB0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trim13Q9CYB0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim13Q9CYB0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Trim13Q9CYB0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim13Q9CYB0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim13Q9CYB0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim13Q9CYB0 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim13Q9CYB0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Trim13Q9CYB0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim13Q9CYB0 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.47■□□□□ 0.55
Trim13Q9CYB0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Trim13Q9CYB0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Trim13Q9CYB0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Trim13Q9CYB0 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trim13Q9CYB0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim13Q9CYB0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim13Q9CYB0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Trim13Q9CYB0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim13Q9CYB0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
Trim13Q9CYB0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim13Q9CYB0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trim13Q9CYB0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim13Q9CYB0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trim13Q9CYB0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trim13Q9CYB0 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms