Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Khdc3Q9CWU5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Khdc3Q9CWU5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Khdc3Q9CWU5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Khdc3Q9CWU5 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Khdc3Q9CWU5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Khdc3Q9CWU5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Khdc3Q9CWU5 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Khdc3Q9CWU5 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Khdc3Q9CWU5 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.25■□□□□ 0.67
Khdc3Q9CWU5 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Khdc3Q9CWU5 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Khdc3Q9CWU5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Khdc3Q9CWU5 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.25■□□□□ 0.67
Khdc3Q9CWU5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Khdc3Q9CWU5 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Khdc3Q9CWU5 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Khdc3Q9CWU5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Khdc3Q9CWU5 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Khdc3Q9CWU5 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Khdc3Q9CWU5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Khdc3Q9CWU5 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.24■□□□□ 0.67
Khdc3Q9CWU5 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.24■□□□□ 0.67
Khdc3Q9CWU5 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.24■□□□□ 0.67
Khdc3Q9CWU5 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Khdc3Q9CWU5 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Khdc3Q9CWU5 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.24■□□□□ 0.67
Khdc3Q9CWU5 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Khdc3Q9CWU5 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Khdc3Q9CWU5 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.24■□□□□ 0.67
Khdc3Q9CWU5 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Khdc3Q9CWU5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Khdc3Q9CWU5 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Khdc3Q9CWU5 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Khdc3Q9CWU5 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Khdc3Q9CWU5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Khdc3Q9CWU5 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Khdc3Q9CWU5 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Khdc3Q9CWU5 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Khdc3Q9CWU5 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Khdc3Q9CWU5 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Khdc3Q9CWU5 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.22■□□□□ 0.67
Khdc3Q9CWU5 Gm22238-201ENSMUST00000175222 88 ntBASIC19.22■□□□□ 0.67
Khdc3Q9CWU5 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.22■□□□□ 0.67
Khdc3Q9CWU5 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Khdc3Q9CWU5 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Khdc3Q9CWU5 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Khdc3Q9CWU5 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Khdc3Q9CWU5 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.21■□□□□ 0.67
Khdc3Q9CWU5 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Khdc3Q9CWU5 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Khdc3Q9CWU5 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Khdc3Q9CWU5 Gm9870-201ENSMUST00000063874 645 ntBASIC19.21■□□□□ 0.67
Khdc3Q9CWU5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Khdc3Q9CWU5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Khdc3Q9CWU5 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Khdc3Q9CWU5 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Khdc3Q9CWU5 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Khdc3Q9CWU5 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Khdc3Q9CWU5 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.2■□□□□ 0.66
Khdc3Q9CWU5 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Khdc3Q9CWU5 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Khdc3Q9CWU5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Khdc3Q9CWU5 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
Khdc3Q9CWU5 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Khdc3Q9CWU5 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Khdc3Q9CWU5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Khdc3Q9CWU5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Khdc3Q9CWU5 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Khdc3Q9CWU5 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Khdc3Q9CWU5 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Khdc3Q9CWU5 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Khdc3Q9CWU5 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Khdc3Q9CWU5 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Khdc3Q9CWU5 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.19■□□□□ 0.66
Khdc3Q9CWU5 Notumos-201ENSMUST00000151998 2659 ntBASIC19.19■□□□□ 0.66
Khdc3Q9CWU5 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Khdc3Q9CWU5 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Khdc3Q9CWU5 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Khdc3Q9CWU5 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Khdc3Q9CWU5 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Khdc3Q9CWU5 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Khdc3Q9CWU5 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.18■□□□□ 0.66
Khdc3Q9CWU5 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.18■□□□□ 0.66
Khdc3Q9CWU5 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.18■□□□□ 0.66
Khdc3Q9CWU5 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.18■□□□□ 0.66
Khdc3Q9CWU5 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Khdc3Q9CWU5 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Khdc3Q9CWU5 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Khdc3Q9CWU5 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Khdc3Q9CWU5 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Khdc3Q9CWU5 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Khdc3Q9CWU5 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Khdc3Q9CWU5 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Khdc3Q9CWU5 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Khdc3Q9CWU5 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.17■□□□□ 0.66
Khdc3Q9CWU5 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Khdc3Q9CWU5 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.17■□□□□ 0.66
Khdc3Q9CWU5 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Khdc3Q9CWU5 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms