Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.51■□□□□ 0.71
Msh4Q99MT2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Msh4Q99MT2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.51■□□□□ 0.71
Msh4Q99MT2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Msh4Q99MT2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Msh4Q99MT2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msh4Q99MT2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msh4Q99MT2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msh4Q99MT2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Msh4Q99MT2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Msh4Q99MT2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Msh4Q99MT2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Msh4Q99MT2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Msh4Q99MT2 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.5■□□□□ 0.71
Msh4Q99MT2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.5■□□□□ 0.71
Msh4Q99MT2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh4Q99MT2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Msh4Q99MT2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh4Q99MT2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh4Q99MT2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Msh4Q99MT2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh4Q99MT2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Msh4Q99MT2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh4Q99MT2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Msh4Q99MT2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.49■□□□□ 0.71
Msh4Q99MT2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Msh4Q99MT2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Msh4Q99MT2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Msh4Q99MT2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Msh4Q99MT2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Msh4Q99MT2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.48■□□□□ 0.71
Msh4Q99MT2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Msh4Q99MT2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Msh4Q99MT2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Msh4Q99MT2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Msh4Q99MT2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh4Q99MT2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh4Q99MT2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh4Q99MT2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.47■□□□□ 0.71
Msh4Q99MT2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Msh4Q99MT2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.47■□□□□ 0.71
Msh4Q99MT2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh4Q99MT2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh4Q99MT2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Msh4Q99MT2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Msh4Q99MT2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Msh4Q99MT2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Msh4Q99MT2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Msh4Q99MT2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Msh4Q99MT2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Msh4Q99MT2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Msh4Q99MT2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Msh4Q99MT2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Msh4Q99MT2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh4Q99MT2 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.45■□□□□ 0.7
Msh4Q99MT2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh4Q99MT2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh4Q99MT2 Gm21956-201ENSMUST00000179946 522 ntBASIC19.45■□□□□ 0.7
Msh4Q99MT2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.45■□□□□ 0.7
Msh4Q99MT2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh4Q99MT2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Msh4Q99MT2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh4Q99MT2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh4Q99MT2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh4Q99MT2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Msh4Q99MT2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh4Q99MT2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.44■□□□□ 0.7
Msh4Q99MT2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Msh4Q99MT2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh4Q99MT2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Msh4Q99MT2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh4Q99MT2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.44■□□□□ 0.7
Msh4Q99MT2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh4Q99MT2 Gm9870-201ENSMUST00000063874 645 ntBASIC19.44■□□□□ 0.7
Msh4Q99MT2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh4Q99MT2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Msh4Q99MT2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh4Q99MT2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh4Q99MT2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Msh4Q99MT2 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Msh4Q99MT2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Msh4Q99MT2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh4Q99MT2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh4Q99MT2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh4Q99MT2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.43■□□□□ 0.7
Msh4Q99MT2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.43■□□□□ 0.7
Msh4Q99MT2 Golgb1-201ENSMUST00000023534 498 ntBASIC19.43■□□□□ 0.7
Msh4Q99MT2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh4Q99MT2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh4Q99MT2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh4Q99MT2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh4Q99MT2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh4Q99MT2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh4Q99MT2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh4Q99MT2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Msh4Q99MT2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Msh4Q99MT2 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.42■□□□□ 0.7
Msh4Q99MT2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Msh4Q99MT2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Msh4Q99MT2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms