Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tlr3Q99MB1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tlr3Q99MB1 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tlr3Q99MB1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tlr3Q99MB1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.6■■□□□ 1.05
Tlr3Q99MB1 Gm43530-201ENSMUST00000195920 274 ntBASIC21.6■■□□□ 1.05
Tlr3Q99MB1 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.6■■□□□ 1.05
Tlr3Q99MB1 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.6■■□□□ 1.05
Tlr3Q99MB1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tlr3Q99MB1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tlr3Q99MB1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Tlr3Q99MB1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.6■■□□□ 1.05
Tlr3Q99MB1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tlr3Q99MB1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tlr3Q99MB1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tlr3Q99MB1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tlr3Q99MB1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Tlr3Q99MB1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.59■■□□□ 1.05
Tlr3Q99MB1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tlr3Q99MB1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.59■■□□□ 1.05
Tlr3Q99MB1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tlr3Q99MB1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tlr3Q99MB1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.59■■□□□ 1.05
Tlr3Q99MB1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Tlr3Q99MB1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tlr3Q99MB1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.58■■□□□ 1.05
Tlr3Q99MB1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.58■■□□□ 1.05
Tlr3Q99MB1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.58■■□□□ 1.05
Tlr3Q99MB1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
Tlr3Q99MB1 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Tlr3Q99MB1 Serp2-204ENSMUST00000228055 705 ntBASIC21.58■■□□□ 1.05
Tlr3Q99MB1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tlr3Q99MB1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tlr3Q99MB1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Tlr3Q99MB1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Tlr3Q99MB1 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Tlr3Q99MB1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tlr3Q99MB1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tlr3Q99MB1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tlr3Q99MB1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.57■■□□□ 1.04
Tlr3Q99MB1 Gm12821-201ENSMUST00000120022 600 ntBASIC21.57■■□□□ 1.04
Tlr3Q99MB1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Tlr3Q99MB1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tlr3Q99MB1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Tlr3Q99MB1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tlr3Q99MB1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Tlr3Q99MB1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tlr3Q99MB1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tlr3Q99MB1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Tlr3Q99MB1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.56■■□□□ 1.04
Tlr3Q99MB1 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.56■■□□□ 1.04
Tlr3Q99MB1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.56■■□□□ 1.04
Tlr3Q99MB1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.56■■□□□ 1.04
Tlr3Q99MB1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tlr3Q99MB1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tlr3Q99MB1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tlr3Q99MB1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
Tlr3Q99MB1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tlr3Q99MB1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tlr3Q99MB1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tlr3Q99MB1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tlr3Q99MB1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Tlr3Q99MB1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tlr3Q99MB1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tlr3Q99MB1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tlr3Q99MB1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tlr3Q99MB1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tlr3Q99MB1 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tlr3Q99MB1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tlr3Q99MB1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.54■■□□□ 1.04
Tlr3Q99MB1 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.54■■□□□ 1.04
Tlr3Q99MB1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.54■■□□□ 1.04
Tlr3Q99MB1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tlr3Q99MB1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
Tlr3Q99MB1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tlr3Q99MB1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Tlr3Q99MB1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tlr3Q99MB1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tlr3Q99MB1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Tlr3Q99MB1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Tlr3Q99MB1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tlr3Q99MB1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tlr3Q99MB1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Tlr3Q99MB1 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
Tlr3Q99MB1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tlr3Q99MB1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Tlr3Q99MB1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tlr3Q99MB1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tlr3Q99MB1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tlr3Q99MB1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Tlr3Q99MB1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.52■■□□□ 1.04
Tlr3Q99MB1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Tlr3Q99MB1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tlr3Q99MB1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Tlr3Q99MB1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Tlr3Q99MB1 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.51■■□□□ 1.03
Tlr3Q99MB1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.51■■□□□ 1.03
Tlr3Q99MB1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Tlr3Q99MB1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Tlr3Q99MB1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms