Protein–RNA interactions for Protein: Q923D4

Sf3b5, Splicing factor 3B subunit 5, mousemouse

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b5Q923D4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3b5Q923D4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3b5Q923D4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3b5Q923D4 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.78■□□□□ 0.44
Sf3b5Q923D4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sf3b5Q923D4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.77■□□□□ 0.44
Sf3b5Q923D4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sf3b5Q923D4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Sf3b5Q923D4 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.77■□□□□ 0.44
Sf3b5Q923D4 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sf3b5Q923D4 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sf3b5Q923D4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Sf3b5Q923D4 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sf3b5Q923D4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sf3b5Q923D4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.77■□□□□ 0.43
Sf3b5Q923D4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Sf3b5Q923D4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sf3b5Q923D4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Sf3b5Q923D4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sf3b5Q923D4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Sf3b5Q923D4 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.76■□□□□ 0.43
Sf3b5Q923D4 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sf3b5Q923D4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sf3b5Q923D4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Sf3b5Q923D4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.76■□□□□ 0.43
Sf3b5Q923D4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Sf3b5Q923D4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.76■□□□□ 0.43
Sf3b5Q923D4 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sf3b5Q923D4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sf3b5Q923D4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sf3b5Q923D4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sf3b5Q923D4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Sf3b5Q923D4 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.76■□□□□ 0.43
Sf3b5Q923D4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sf3b5Q923D4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Sf3b5Q923D4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sf3b5Q923D4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sf3b5Q923D4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sf3b5Q923D4 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.75■□□□□ 0.43
Sf3b5Q923D4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Sf3b5Q923D4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Sf3b5Q923D4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Sf3b5Q923D4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sf3b5Q923D4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sf3b5Q923D4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sf3b5Q923D4 Gm21956-201ENSMUST00000179946 522 ntBASIC17.74■□□□□ 0.43
Sf3b5Q923D4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.74■□□□□ 0.43
Sf3b5Q923D4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.74■□□□□ 0.43
Sf3b5Q923D4 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.74■□□□□ 0.43
Sf3b5Q923D4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sf3b5Q923D4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sf3b5Q923D4 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sf3b5Q923D4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Sf3b5Q923D4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sf3b5Q923D4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3b5Q923D4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3b5Q923D4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3b5Q923D4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3b5Q923D4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3b5Q923D4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3b5Q923D4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3b5Q923D4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3b5Q923D4 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3b5Q923D4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sf3b5Q923D4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.73■□□□□ 0.43
Sf3b5Q923D4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sf3b5Q923D4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Sf3b5Q923D4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sf3b5Q923D4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sf3b5Q923D4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.72■□□□□ 0.43
Sf3b5Q923D4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.72■□□□□ 0.43
Sf3b5Q923D4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.72■□□□□ 0.43
Sf3b5Q923D4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
Sf3b5Q923D4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sf3b5Q923D4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sf3b5Q923D4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sf3b5Q923D4 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Sf3b5Q923D4 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.72■□□□□ 0.43
Sf3b5Q923D4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sf3b5Q923D4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sf3b5Q923D4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sf3b5Q923D4 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sf3b5Q923D4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.71■□□□□ 0.43
Sf3b5Q923D4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sf3b5Q923D4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sf3b5Q923D4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Sf3b5Q923D4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Sf3b5Q923D4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sf3b5Q923D4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sf3b5Q923D4 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Sf3b5Q923D4 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Sf3b5Q923D4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.7■□□□□ 0.42
Sf3b5Q923D4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sf3b5Q923D4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sf3b5Q923D4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sf3b5Q923D4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Sf3b5Q923D4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Sf3b5Q923D4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Sf3b5Q923D4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Sf3b5Q923D4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms