Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdha9Q91Y11 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.47■■□□□ 1.03
Pcdha9Q91Y11 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdha9Q91Y11 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Pcdha9Q91Y11 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Pcdha9Q91Y11 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdha9Q91Y11 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Pcdha9Q91Y11 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.45■■□□□ 1.02
Pcdha9Q91Y11 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.45■■□□□ 1.02
Pcdha9Q91Y11 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdha9Q91Y11 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdha9Q91Y11 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.45■■□□□ 1.02
Pcdha9Q91Y11 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdha9Q91Y11 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdha9Q91Y11 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdha9Q91Y11 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Pcdha9Q91Y11 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.44■■□□□ 1.02
Pcdha9Q91Y11 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Pcdha9Q91Y11 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdha9Q91Y11 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdha9Q91Y11 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdha9Q91Y11 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha9Q91Y11 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha9Q91Y11 Gm21956-201ENSMUST00000179946 522 ntBASIC21.43■■□□□ 1.02
Pcdha9Q91Y11 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha9Q91Y11 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha9Q91Y11 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Pcdha9Q91Y11 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha9Q91Y11 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdha9Q91Y11 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdha9Q91Y11 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdha9Q91Y11 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.42■■□□□ 1.02
Pcdha9Q91Y11 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.42■■□□□ 1.02
Pcdha9Q91Y11 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdha9Q91Y11 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdha9Q91Y11 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdha9Q91Y11 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdha9Q91Y11 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdha9Q91Y11 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdha9Q91Y11 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Pcdha9Q91Y11 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Pcdha9Q91Y11 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Pcdha9Q91Y11 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdha9Q91Y11 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdha9Q91Y11 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdha9Q91Y11 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Pcdha9Q91Y11 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdha9Q91Y11 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdha9Q91Y11 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdha9Q91Y11 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdha9Q91Y11 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.4■■□□□ 1.02
Pcdha9Q91Y11 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Pcdha9Q91Y11 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdha9Q91Y11 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.39■■□□□ 1.02
Pcdha9Q91Y11 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdha9Q91Y11 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.39■■□□□ 1.01
Pcdha9Q91Y11 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdha9Q91Y11 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdha9Q91Y11 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdha9Q91Y11 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Pcdha9Q91Y11 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha9Q91Y11 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha9Q91Y11 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha9Q91Y11 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Pcdha9Q91Y11 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha9Q91Y11 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha9Q91Y11 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha9Q91Y11 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha9Q91Y11 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha9Q91Y11 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha9Q91Y11 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.38■■□□□ 1.01
Pcdha9Q91Y11 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.38■■□□□ 1.01
Pcdha9Q91Y11 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha9Q91Y11 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha9Q91Y11 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdha9Q91Y11 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.38■■□□□ 1.01
Pcdha9Q91Y11 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdha9Q91Y11 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdha9Q91Y11 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.37■■□□□ 1.01
Pcdha9Q91Y11 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdha9Q91Y11 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdha9Q91Y11 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdha9Q91Y11 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdha9Q91Y11 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdha9Q91Y11 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Pcdha9Q91Y11 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.37■■□□□ 1.01
Pcdha9Q91Y11 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdha9Q91Y11 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdha9Q91Y11 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdha9Q91Y11 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdha9Q91Y11 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
Pcdha9Q91Y11 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.35■■□□□ 1.01
Pcdha9Q91Y11 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdha9Q91Y11 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdha9Q91Y11 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdha9Q91Y11 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdha9Q91Y11 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
Pcdha9Q91Y11 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdha9Q91Y11 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.35■■□□□ 1.01
Pcdha9Q91Y11 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms