Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.31■□□□□ 0.68
Pcdhb20Q91XZ9 Mir7075-201ENSMUST00000184187 82 ntBASIC19.31■□□□□ 0.68
Pcdhb20Q91XZ9 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.31■□□□□ 0.68
Pcdhb20Q91XZ9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pcdhb20Q91XZ9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.31■□□□□ 0.68
Pcdhb20Q91XZ9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb20Q91XZ9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdhb20Q91XZ9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb20Q91XZ9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb20Q91XZ9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhb20Q91XZ9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb20Q91XZ9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb20Q91XZ9 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.3■□□□□ 0.68
Pcdhb20Q91XZ9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb20Q91XZ9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb20Q91XZ9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb20Q91XZ9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Pcdhb20Q91XZ9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Pcdhb20Q91XZ9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Pcdhb20Q91XZ9 Gm13323-201ENSMUST00000120245 1151 ntBASIC19.3■□□□□ 0.68
Pcdhb20Q91XZ9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb20Q91XZ9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Pcdhb20Q91XZ9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Pcdhb20Q91XZ9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhb20Q91XZ9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhb20Q91XZ9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb20Q91XZ9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pcdhb20Q91XZ9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhb20Q91XZ9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pcdhb20Q91XZ9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pcdhb20Q91XZ9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhb20Q91XZ9 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb20Q91XZ9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb20Q91XZ9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhb20Q91XZ9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb20Q91XZ9 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb20Q91XZ9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Pcdhb20Q91XZ9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Pcdhb20Q91XZ9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb20Q91XZ9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.28■□□□□ 0.68
Pcdhb20Q91XZ9 Mir6236-201ENSMUST00000184437 123 ntBASIC19.28■□□□□ 0.68
Pcdhb20Q91XZ9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Pcdhb20Q91XZ9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb20Q91XZ9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb20Q91XZ9 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb20Q91XZ9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.28■□□□□ 0.68
Pcdhb20Q91XZ9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb20Q91XZ9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhb20Q91XZ9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb20Q91XZ9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Pcdhb20Q91XZ9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb20Q91XZ9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhb20Q91XZ9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Pcdhb20Q91XZ9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhb20Q91XZ9 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb20Q91XZ9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb20Q91XZ9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.26■□□□□ 0.67
Pcdhb20Q91XZ9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
Pcdhb20Q91XZ9 Gm6139-201ENSMUST00000079261 882 ntBASIC19.26■□□□□ 0.67
Pcdhb20Q91XZ9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.26■□□□□ 0.67
Pcdhb20Q91XZ9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Pcdhb20Q91XZ9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb20Q91XZ9 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.26■□□□□ 0.67
Pcdhb20Q91XZ9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb20Q91XZ9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb20Q91XZ9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb20Q91XZ9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb20Q91XZ9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb20Q91XZ9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb20Q91XZ9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb20Q91XZ9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb20Q91XZ9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb20Q91XZ9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb20Q91XZ9 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.25■□□□□ 0.67
Pcdhb20Q91XZ9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcdhb20Q91XZ9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb20Q91XZ9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb20Q91XZ9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb20Q91XZ9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhb20Q91XZ9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhb20Q91XZ9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb20Q91XZ9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb20Q91XZ9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb20Q91XZ9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb20Q91XZ9 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.24■□□□□ 0.67
Pcdhb20Q91XZ9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb20Q91XZ9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb20Q91XZ9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb20Q91XZ9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb20Q91XZ9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb20Q91XZ9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb20Q91XZ9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb20Q91XZ9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb20Q91XZ9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb20Q91XZ9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb20Q91XZ9 Gm8493-201ENSMUST00000196881 489 ntBASIC19.23■□□□□ 0.67
Pcdhb20Q91XZ9 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.23■□□□□ 0.67
Pcdhb20Q91XZ9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb20Q91XZ9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb20Q91XZ9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms