Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trex1Q91XB0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Trex1Q91XB0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC23.25■■□□□ 1.31
Trex1Q91XB0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trex1Q91XB0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trex1Q91XB0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trex1Q91XB0 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Trex1Q91XB0 Mir6236-201ENSMUST00000184437 123 ntBASIC23.25■■□□□ 1.31
Trex1Q91XB0 Gm29257-201ENSMUST00000186115 639 ntBASIC23.25■■□□□ 1.31
Trex1Q91XB0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Trex1Q91XB0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trex1Q91XB0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC23.24■■□□□ 1.31
Trex1Q91XB0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trex1Q91XB0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC23.24■■□□□ 1.31
Trex1Q91XB0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trex1Q91XB0 Gm42642-201ENSMUST00000200683 355 ntBASIC23.24■■□□□ 1.31
Trex1Q91XB0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trex1Q91XB0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trex1Q91XB0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trex1Q91XB0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trex1Q91XB0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trex1Q91XB0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trex1Q91XB0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Trex1Q91XB0 Gm7291-201ENSMUST00000199147 382 ntBASIC23.23■■□□□ 1.31
Trex1Q91XB0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC23.23■■□□□ 1.31
Trex1Q91XB0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trex1Q91XB0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC23.23■■□□□ 1.31
Trex1Q91XB0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trex1Q91XB0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Trex1Q91XB0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trex1Q91XB0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trex1Q91XB0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Trex1Q91XB0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Trex1Q91XB0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Trex1Q91XB0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trex1Q91XB0 Gm42569-201ENSMUST00000200539 472 ntBASIC23.21■■□□□ 1.31
Trex1Q91XB0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC23.21■■□□□ 1.31
Trex1Q91XB0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trex1Q91XB0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trex1Q91XB0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trex1Q91XB0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trex1Q91XB0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trex1Q91XB0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trex1Q91XB0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trex1Q91XB0 Gm11421-201ENSMUST00000122124 294 ntBASIC23.2■■□□□ 1.3
Trex1Q91XB0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Trex1Q91XB0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trex1Q91XB0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Trex1Q91XB0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Trex1Q91XB0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trex1Q91XB0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trex1Q91XB0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trex1Q91XB0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trex1Q91XB0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trex1Q91XB0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Trex1Q91XB0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trex1Q91XB0 Gm10849-201ENSMUST00000100397 618 ntBASIC23.18■■□□□ 1.3
Trex1Q91XB0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Trex1Q91XB0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Trex1Q91XB0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
Trex1Q91XB0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trex1Q91XB0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC23.17■■□□□ 1.3
Trex1Q91XB0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trex1Q91XB0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Trex1Q91XB0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Trex1Q91XB0 Gm27405-201ENSMUST00000184201 112 ntBASIC23.17■■□□□ 1.3
Trex1Q91XB0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC23.17■■□□□ 1.3
Trex1Q91XB0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trex1Q91XB0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC23.16■■□□□ 1.3
Trex1Q91XB0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trex1Q91XB0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trex1Q91XB0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trex1Q91XB0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trex1Q91XB0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC23.15■■□□□ 1.3
Trex1Q91XB0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trex1Q91XB0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC23.15■■□□□ 1.3
Trex1Q91XB0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trex1Q91XB0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC23.15■■□□□ 1.3
Trex1Q91XB0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trex1Q91XB0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Trex1Q91XB0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trex1Q91XB0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trex1Q91XB0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Trex1Q91XB0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Trex1Q91XB0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Trex1Q91XB0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trex1Q91XB0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trex1Q91XB0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trex1Q91XB0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trex1Q91XB0 Gm32051-202ENSMUST00000197905 2385 ntBASIC23.13■■□□□ 1.29
Trex1Q91XB0 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC23.13■■□□□ 1.29
Trex1Q91XB0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Trex1Q91XB0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Trex1Q91XB0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trex1Q91XB0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trex1Q91XB0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trex1Q91XB0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trex1Q91XB0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trex1Q91XB0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
Trex1Q91XB0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms