Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tram1Q91V04 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Tram1Q91V04 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tram1Q91V04 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tram1Q91V04 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Tram1Q91V04 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Tram1Q91V04 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tram1Q91V04 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
Tram1Q91V04 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tram1Q91V04 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tram1Q91V04 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tram1Q91V04 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tram1Q91V04 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tram1Q91V04 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tram1Q91V04 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tram1Q91V04 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Tram1Q91V04 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tram1Q91V04 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tram1Q91V04 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.27■□□□□ 0.35
Tram1Q91V04 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Tram1Q91V04 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tram1Q91V04 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.27■□□□□ 0.35
Tram1Q91V04 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tram1Q91V04 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tram1Q91V04 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.26■□□□□ 0.35
Tram1Q91V04 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tram1Q91V04 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tram1Q91V04 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tram1Q91V04 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Tram1Q91V04 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tram1Q91V04 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tram1Q91V04 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.25■□□□□ 0.35
Tram1Q91V04 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Tram1Q91V04 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Tram1Q91V04 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tram1Q91V04 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tram1Q91V04 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.25■□□□□ 0.35
Tram1Q91V04 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tram1Q91V04 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tram1Q91V04 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tram1Q91V04 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Tram1Q91V04 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.25■□□□□ 0.35
Tram1Q91V04 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.24■□□□□ 0.35
Tram1Q91V04 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tram1Q91V04 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tram1Q91V04 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tram1Q91V04 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tram1Q91V04 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tram1Q91V04 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tram1Q91V04 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Tram1Q91V04 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tram1Q91V04 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tram1Q91V04 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Tram1Q91V04 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tram1Q91V04 Scarna2-201ENSMUST00000157560 414 ntBASIC17.24■□□□□ 0.35
Tram1Q91V04 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.24■□□□□ 0.35
Tram1Q91V04 Gm16437-201ENSMUST00000025669 507 ntBASIC17.24■□□□□ 0.35
Tram1Q91V04 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tram1Q91V04 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Tram1Q91V04 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Tram1Q91V04 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tram1Q91V04 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Tram1Q91V04 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.23■□□□□ 0.35
Tram1Q91V04 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Tram1Q91V04 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tram1Q91V04 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tram1Q91V04 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tram1Q91V04 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tram1Q91V04 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tram1Q91V04 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tram1Q91V04 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tram1Q91V04 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.22■□□□□ 0.35
Tram1Q91V04 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.22■□□□□ 0.35
Tram1Q91V04 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.22■□□□□ 0.35
Tram1Q91V04 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tram1Q91V04 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Tram1Q91V04 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tram1Q91V04 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.21■□□□□ 0.35
Tram1Q91V04 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Tram1Q91V04 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tram1Q91V04 Gm11687-201ENSMUST00000118911 886 ntBASIC17.21■□□□□ 0.35
Tram1Q91V04 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tram1Q91V04 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tram1Q91V04 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.21■□□□□ 0.34
Tram1Q91V04 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Tram1Q91V04 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tram1Q91V04 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Tram1Q91V04 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.2■□□□□ 0.34
Tram1Q91V04 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Tram1Q91V04 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tram1Q91V04 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Tram1Q91V04 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tram1Q91V04 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tram1Q91V04 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Tram1Q91V04 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tram1Q91V04 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.19■□□□□ 0.34
Tram1Q91V04 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tram1Q91V04 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tram1Q91V04 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Tram1Q91V04 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms