Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H1fooQ8VIK3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H1fooQ8VIK3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
H1fooQ8VIK3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
H1fooQ8VIK3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
H1fooQ8VIK3 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H1fooQ8VIK3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H1fooQ8VIK3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H1fooQ8VIK3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H1fooQ8VIK3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
H1fooQ8VIK3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
H1fooQ8VIK3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H1fooQ8VIK3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
H1fooQ8VIK3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H1fooQ8VIK3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
H1fooQ8VIK3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
H1fooQ8VIK3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H1fooQ8VIK3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
H1fooQ8VIK3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
H1fooQ8VIK3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H1fooQ8VIK3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
H1fooQ8VIK3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
H1fooQ8VIK3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H1fooQ8VIK3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
H1fooQ8VIK3 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H1fooQ8VIK3 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
H1fooQ8VIK3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.79■□□□□ 0.28
H1fooQ8VIK3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
H1fooQ8VIK3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H1fooQ8VIK3 Gm7417-201ENSMUST00000192950 473 ntBASIC16.79■□□□□ 0.28
H1fooQ8VIK3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H1fooQ8VIK3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
H1fooQ8VIK3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
H1fooQ8VIK3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H1fooQ8VIK3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H1fooQ8VIK3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H1fooQ8VIK3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
H1fooQ8VIK3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H1fooQ8VIK3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H1fooQ8VIK3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H1fooQ8VIK3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H1fooQ8VIK3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
H1fooQ8VIK3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H1fooQ8VIK3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H1fooQ8VIK3 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H1fooQ8VIK3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
H1fooQ8VIK3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H1fooQ8VIK3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H1fooQ8VIK3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
H1fooQ8VIK3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
H1fooQ8VIK3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
H1fooQ8VIK3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
H1fooQ8VIK3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
H1fooQ8VIK3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.77■□□□□ 0.28
H1fooQ8VIK3 Etf1-202ENSMUST00000180351 108 ntBASIC16.77■□□□□ 0.28
H1fooQ8VIK3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
H1fooQ8VIK3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.77■□□□□ 0.28
H1fooQ8VIK3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
H1fooQ8VIK3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
H1fooQ8VIK3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.77■□□□□ 0.28
H1fooQ8VIK3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
H1fooQ8VIK3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
H1fooQ8VIK3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H1fooQ8VIK3 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.76■□□□□ 0.27
H1fooQ8VIK3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
H1fooQ8VIK3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
H1fooQ8VIK3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
H1fooQ8VIK3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
H1fooQ8VIK3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H1fooQ8VIK3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H1fooQ8VIK3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.76■□□□□ 0.27
H1fooQ8VIK3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
H1fooQ8VIK3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H1fooQ8VIK3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
H1fooQ8VIK3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
H1fooQ8VIK3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H1fooQ8VIK3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
H1fooQ8VIK3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H1fooQ8VIK3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
H1fooQ8VIK3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H1fooQ8VIK3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.75■□□□□ 0.27
H1fooQ8VIK3 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
H1fooQ8VIK3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
H1fooQ8VIK3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H1fooQ8VIK3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
H1fooQ8VIK3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H1fooQ8VIK3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
H1fooQ8VIK3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.75■□□□□ 0.27
H1fooQ8VIK3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H1fooQ8VIK3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.75■□□□□ 0.27
H1fooQ8VIK3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
H1fooQ8VIK3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
H1fooQ8VIK3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
H1fooQ8VIK3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
H1fooQ8VIK3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.74■□□□□ 0.27
H1fooQ8VIK3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
H1fooQ8VIK3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H1fooQ8VIK3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H1fooQ8VIK3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
H1fooQ8VIK3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms