Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Cspg4Q8VHY0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cspg4Q8VHY0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cspg4Q8VHY0 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cspg4Q8VHY0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cspg4Q8VHY0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Cspg4Q8VHY0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.45■□□□□ 0.38
Cspg4Q8VHY0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Cspg4Q8VHY0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Cspg4Q8VHY0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cspg4Q8VHY0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cspg4Q8VHY0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cspg4Q8VHY0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Cspg4Q8VHY0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cspg4Q8VHY0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cspg4Q8VHY0 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.44■□□□□ 0.38
Cspg4Q8VHY0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.44■□□□□ 0.38
Cspg4Q8VHY0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cspg4Q8VHY0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cspg4Q8VHY0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cspg4Q8VHY0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cspg4Q8VHY0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.43■□□□□ 0.38
Cspg4Q8VHY0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.43■□□□□ 0.38
Cspg4Q8VHY0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cspg4Q8VHY0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cspg4Q8VHY0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Cspg4Q8VHY0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cspg4Q8VHY0 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.43■□□□□ 0.38
Cspg4Q8VHY0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cspg4Q8VHY0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cspg4Q8VHY0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cspg4Q8VHY0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cspg4Q8VHY0 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.42■□□□□ 0.38
Cspg4Q8VHY0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cspg4Q8VHY0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Cspg4Q8VHY0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.42■□□□□ 0.38
Cspg4Q8VHY0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.42■□□□□ 0.38
Cspg4Q8VHY0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cspg4Q8VHY0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cspg4Q8VHY0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cspg4Q8VHY0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cspg4Q8VHY0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cspg4Q8VHY0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cspg4Q8VHY0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cspg4Q8VHY0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cspg4Q8VHY0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cspg4Q8VHY0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.41■□□□□ 0.38
Cspg4Q8VHY0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Cspg4Q8VHY0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cspg4Q8VHY0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.4■□□□□ 0.38
Cspg4Q8VHY0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cspg4Q8VHY0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cspg4Q8VHY0 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.4■□□□□ 0.38
Cspg4Q8VHY0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cspg4Q8VHY0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cspg4Q8VHY0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cspg4Q8VHY0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cspg4Q8VHY0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cspg4Q8VHY0 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cspg4Q8VHY0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cspg4Q8VHY0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cspg4Q8VHY0 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Cspg4Q8VHY0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cspg4Q8VHY0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Cspg4Q8VHY0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cspg4Q8VHY0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cspg4Q8VHY0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.39■□□□□ 0.37
Cspg4Q8VHY0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.39■□□□□ 0.37
Cspg4Q8VHY0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cspg4Q8VHY0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cspg4Q8VHY0 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cspg4Q8VHY0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cspg4Q8VHY0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cspg4Q8VHY0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Cspg4Q8VHY0 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cspg4Q8VHY0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cspg4Q8VHY0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cspg4Q8VHY0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.38■□□□□ 0.37
Cspg4Q8VHY0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Cspg4Q8VHY0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cspg4Q8VHY0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cspg4Q8VHY0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cspg4Q8VHY0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cspg4Q8VHY0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cspg4Q8VHY0 Gm13168-201ENSMUST00000121771 632 ntBASIC17.38■□□□□ 0.37
Cspg4Q8VHY0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.38■□□□□ 0.37
Cspg4Q8VHY0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cspg4Q8VHY0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cspg4Q8VHY0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cspg4Q8VHY0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cspg4Q8VHY0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cspg4Q8VHY0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.37■□□□□ 0.37
Cspg4Q8VHY0 Reep4-203ENSMUST00000226563 1444 ntBASIC17.37■□□□□ 0.37
Cspg4Q8VHY0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cspg4Q8VHY0 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cspg4Q8VHY0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cspg4Q8VHY0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cspg4Q8VHY0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cspg4Q8VHY0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cspg4Q8VHY0 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms