Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chrna3Q8R4G9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Chrna3Q8R4G9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chrna3Q8R4G9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chrna3Q8R4G9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chrna3Q8R4G9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Chrna3Q8R4G9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chrna3Q8R4G9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Chrna3Q8R4G9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chrna3Q8R4G9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Chrna3Q8R4G9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.74■□□□□ 0.75
Chrna3Q8R4G9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chrna3Q8R4G9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chrna3Q8R4G9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chrna3Q8R4G9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chrna3Q8R4G9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.73■□□□□ 0.75
Chrna3Q8R4G9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Chrna3Q8R4G9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.73■□□□□ 0.75
Chrna3Q8R4G9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chrna3Q8R4G9 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.73■□□□□ 0.75
Chrna3Q8R4G9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Chrna3Q8R4G9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chrna3Q8R4G9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chrna3Q8R4G9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chrna3Q8R4G9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chrna3Q8R4G9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Chrna3Q8R4G9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chrna3Q8R4G9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chrna3Q8R4G9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.72■□□□□ 0.75
Chrna3Q8R4G9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chrna3Q8R4G9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chrna3Q8R4G9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chrna3Q8R4G9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
Chrna3Q8R4G9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna3Q8R4G9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna3Q8R4G9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna3Q8R4G9 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna3Q8R4G9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna3Q8R4G9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna3Q8R4G9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna3Q8R4G9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.71■□□□□ 0.75
Chrna3Q8R4G9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna3Q8R4G9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna3Q8R4G9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna3Q8R4G9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chrna3Q8R4G9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Chrna3Q8R4G9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Chrna3Q8R4G9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Chrna3Q8R4G9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Chrna3Q8R4G9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Chrna3Q8R4G9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Chrna3Q8R4G9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chrna3Q8R4G9 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chrna3Q8R4G9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chrna3Q8R4G9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chrna3Q8R4G9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chrna3Q8R4G9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Chrna3Q8R4G9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chrna3Q8R4G9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.69■□□□□ 0.74
Chrna3Q8R4G9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.69■□□□□ 0.74
Chrna3Q8R4G9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.69■□□□□ 0.74
Chrna3Q8R4G9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.69■□□□□ 0.74
Chrna3Q8R4G9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Chrna3Q8R4G9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chrna3Q8R4G9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chrna3Q8R4G9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chrna3Q8R4G9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chrna3Q8R4G9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.68■□□□□ 0.74
Chrna3Q8R4G9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chrna3Q8R4G9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chrna3Q8R4G9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chrna3Q8R4G9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.68■□□□□ 0.74
Chrna3Q8R4G9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chrna3Q8R4G9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Chrna3Q8R4G9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.68■□□□□ 0.74
Chrna3Q8R4G9 Mir7075-201ENSMUST00000184187 82 ntBASIC19.68■□□□□ 0.74
Chrna3Q8R4G9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
Chrna3Q8R4G9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chrna3Q8R4G9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chrna3Q8R4G9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chrna3Q8R4G9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chrna3Q8R4G9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.68■□□□□ 0.74
Chrna3Q8R4G9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Chrna3Q8R4G9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chrna3Q8R4G9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chrna3Q8R4G9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.67■□□□□ 0.74
Chrna3Q8R4G9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Chrna3Q8R4G9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chrna3Q8R4G9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chrna3Q8R4G9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chrna3Q8R4G9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chrna3Q8R4G9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chrna3Q8R4G9 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.66■□□□□ 0.74
Chrna3Q8R4G9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chrna3Q8R4G9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chrna3Q8R4G9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Chrna3Q8R4G9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chrna3Q8R4G9 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.65■□□□□ 0.74
Chrna3Q8R4G9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chrna3Q8R4G9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms