Protein–RNA interactions for Protein: Q8R480

Nup85, Nuclear pore complex protein Nup85, mousemouse

Known RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup85Q8R480 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nup85Q8R480 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nup85Q8R480 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nup85Q8R480 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nup85Q8R480 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nup85Q8R480 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Nup85Q8R480 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.59■□□□□ 0.89
Nup85Q8R480 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nup85Q8R480 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Nup85Q8R480 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nup85Q8R480 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nup85Q8R480 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Nup85Q8R480 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nup85Q8R480 Gm12821-201ENSMUST00000120022 600 ntBASIC20.58■□□□□ 0.89
Nup85Q8R480 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nup85Q8R480 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nup85Q8R480 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup85Q8R480 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup85Q8R480 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup85Q8R480 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Nup85Q8R480 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup85Q8R480 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup85Q8R480 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Nup85Q8R480 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup85Q8R480 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup85Q8R480 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.56■□□□□ 0.88
Nup85Q8R480 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup85Q8R480 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup85Q8R480 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nup85Q8R480 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup85Q8R480 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nup85Q8R480 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.56■□□□□ 0.88
Nup85Q8R480 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Nup85Q8R480 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nup85Q8R480 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.56■□□□□ 0.88
Nup85Q8R480 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup85Q8R480 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nup85Q8R480 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nup85Q8R480 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Nup85Q8R480 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nup85Q8R480 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nup85Q8R480 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nup85Q8R480 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Nup85Q8R480 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Nup85Q8R480 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nup85Q8R480 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup85Q8R480 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nup85Q8R480 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup85Q8R480 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nup85Q8R480 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nup85Q8R480 Gm9870-201ENSMUST00000063874 645 ntBASIC20.54■□□□□ 0.88
Nup85Q8R480 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup85Q8R480 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Nup85Q8R480 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup85Q8R480 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.53■□□□□ 0.88
Nup85Q8R480 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Nup85Q8R480 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.53■□□□□ 0.88
Nup85Q8R480 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nup85Q8R480 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Nup85Q8R480 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nup85Q8R480 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Nup85Q8R480 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nup85Q8R480 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Nup85Q8R480 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.52■□□□□ 0.88
Nup85Q8R480 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.52■□□□□ 0.88
Nup85Q8R480 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nup85Q8R480 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nup85Q8R480 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nup85Q8R480 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nup85Q8R480 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Nup85Q8R480 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Nup85Q8R480 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nup85Q8R480 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
Nup85Q8R480 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nup85Q8R480 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nup85Q8R480 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nup85Q8R480 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nup85Q8R480 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nup85Q8R480 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nup85Q8R480 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nup85Q8R480 Gm27454-201ENSMUST00000185090 204 ntBASIC20.5■□□□□ 0.87
Nup85Q8R480 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nup85Q8R480 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nup85Q8R480 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.5■□□□□ 0.87
Nup85Q8R480 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nup85Q8R480 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nup85Q8R480 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Nup85Q8R480 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Nup85Q8R480 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nup85Q8R480 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nup85Q8R480 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nup85Q8R480 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Nup85Q8R480 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nup85Q8R480 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
Nup85Q8R480 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nup85Q8R480 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nup85Q8R480 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nup85Q8R480 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nup85Q8R480 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Nup85Q8R480 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms