Protein–RNA interactions for Protein: Q8R1W8

Impg1, Interphotoreceptor matrix proteoglycan 1, mousemouse

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Impg1Q8R1W8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Impg1Q8R1W8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Impg1Q8R1W8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Impg1Q8R1W8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Impg1Q8R1W8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Impg1Q8R1W8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Impg1Q8R1W8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Impg1Q8R1W8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Impg1Q8R1W8 Gm12922-201ENSMUST00000120626 809 ntBASIC20.25■□□□□ 0.83
Impg1Q8R1W8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.25■□□□□ 0.83
Impg1Q8R1W8 Gm43530-201ENSMUST00000195920 274 ntBASIC20.25■□□□□ 0.83
Impg1Q8R1W8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Impg1Q8R1W8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Impg1Q8R1W8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Impg1Q8R1W8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Impg1Q8R1W8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Impg1Q8R1W8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Impg1Q8R1W8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Impg1Q8R1W8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Impg1Q8R1W8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.24■□□□□ 0.83
Impg1Q8R1W8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Impg1Q8R1W8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Impg1Q8R1W8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Impg1Q8R1W8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Impg1Q8R1W8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.23■□□□□ 0.83
Impg1Q8R1W8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Impg1Q8R1W8 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
Impg1Q8R1W8 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.23■□□□□ 0.83
Impg1Q8R1W8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.23■□□□□ 0.83
Impg1Q8R1W8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Impg1Q8R1W8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Impg1Q8R1W8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Impg1Q8R1W8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Impg1Q8R1W8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Impg1Q8R1W8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Impg1Q8R1W8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Impg1Q8R1W8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Impg1Q8R1W8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Impg1Q8R1W8 Golgb1-201ENSMUST00000023534 498 ntBASIC20.22■□□□□ 0.83
Impg1Q8R1W8 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Impg1Q8R1W8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Impg1Q8R1W8 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Impg1Q8R1W8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Impg1Q8R1W8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Impg1Q8R1W8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Impg1Q8R1W8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Impg1Q8R1W8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Impg1Q8R1W8 Gm9847-201ENSMUST00000052528 599 ntBASIC20.21■□□□□ 0.83
Impg1Q8R1W8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Impg1Q8R1W8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Impg1Q8R1W8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Impg1Q8R1W8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Impg1Q8R1W8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Impg1Q8R1W8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Impg1Q8R1W8 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Impg1Q8R1W8 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Impg1Q8R1W8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Impg1Q8R1W8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Impg1Q8R1W8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Impg1Q8R1W8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Impg1Q8R1W8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Impg1Q8R1W8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.2■□□□□ 0.82
Impg1Q8R1W8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Impg1Q8R1W8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Impg1Q8R1W8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Impg1Q8R1W8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Impg1Q8R1W8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Impg1Q8R1W8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.19■□□□□ 0.82
Impg1Q8R1W8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Impg1Q8R1W8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Impg1Q8R1W8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Impg1Q8R1W8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Impg1Q8R1W8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Impg1Q8R1W8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Impg1Q8R1W8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Impg1Q8R1W8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Impg1Q8R1W8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Impg1Q8R1W8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Impg1Q8R1W8 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Impg1Q8R1W8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Impg1Q8R1W8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Impg1Q8R1W8 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.18■□□□□ 0.82
Impg1Q8R1W8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Impg1Q8R1W8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Impg1Q8R1W8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.18■□□□□ 0.82
Impg1Q8R1W8 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Impg1Q8R1W8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.18■□□□□ 0.82
Impg1Q8R1W8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Impg1Q8R1W8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Impg1Q8R1W8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.17■□□□□ 0.82
Impg1Q8R1W8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Impg1Q8R1W8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Impg1Q8R1W8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Impg1Q8R1W8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Impg1Q8R1W8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Impg1Q8R1W8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Impg1Q8R1W8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Impg1Q8R1W8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Impg1Q8R1W8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Impg1Q8R1W8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms