Protein–RNA interactions for Protein: Q8QZR0

Tram1l1, Translocating chain-associated membrane protein 1-like 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1l1Q8QZR0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Tram1l1Q8QZR0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tram1l1Q8QZR0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.25■□□□□ 0.83
Tram1l1Q8QZR0 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tram1l1Q8QZR0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Tram1l1Q8QZR0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tram1l1Q8QZR0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Tram1l1Q8QZR0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tram1l1Q8QZR0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.25■□□□□ 0.83
Tram1l1Q8QZR0 Gm5874-201ENSMUST00000096101 508 ntBASIC20.25■□□□□ 0.83
Tram1l1Q8QZR0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tram1l1Q8QZR0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tram1l1Q8QZR0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tram1l1Q8QZR0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tram1l1Q8QZR0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tram1l1Q8QZR0 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.24■□□□□ 0.83
Tram1l1Q8QZR0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tram1l1Q8QZR0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Tram1l1Q8QZR0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Tram1l1Q8QZR0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Tram1l1Q8QZR0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tram1l1Q8QZR0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tram1l1Q8QZR0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tram1l1Q8QZR0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tram1l1Q8QZR0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tram1l1Q8QZR0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.23■□□□□ 0.83
Tram1l1Q8QZR0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tram1l1Q8QZR0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tram1l1Q8QZR0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tram1l1Q8QZR0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tram1l1Q8QZR0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tram1l1Q8QZR0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tram1l1Q8QZR0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Tram1l1Q8QZR0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tram1l1Q8QZR0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tram1l1Q8QZR0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tram1l1Q8QZR0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.22■□□□□ 0.83
Tram1l1Q8QZR0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tram1l1Q8QZR0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tram1l1Q8QZR0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.22■□□□□ 0.83
Tram1l1Q8QZR0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tram1l1Q8QZR0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tram1l1Q8QZR0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tram1l1Q8QZR0 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.21■□□□□ 0.83
Tram1l1Q8QZR0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tram1l1Q8QZR0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tram1l1Q8QZR0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Tram1l1Q8QZR0 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.2■□□□□ 0.82
Tram1l1Q8QZR0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tram1l1Q8QZR0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tram1l1Q8QZR0 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tram1l1Q8QZR0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Tram1l1Q8QZR0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Tram1l1Q8QZR0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tram1l1Q8QZR0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.19■□□□□ 0.82
Tram1l1Q8QZR0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Tram1l1Q8QZR0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tram1l1Q8QZR0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Tram1l1Q8QZR0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Tram1l1Q8QZR0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tram1l1Q8QZR0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.18■□□□□ 0.82
Tram1l1Q8QZR0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tram1l1Q8QZR0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Tram1l1Q8QZR0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tram1l1Q8QZR0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.18■□□□□ 0.82
Tram1l1Q8QZR0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.18■□□□□ 0.82
Tram1l1Q8QZR0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.18■□□□□ 0.82
Tram1l1Q8QZR0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.18■□□□□ 0.82
Tram1l1Q8QZR0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tram1l1Q8QZR0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Tram1l1Q8QZR0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tram1l1Q8QZR0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tram1l1Q8QZR0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tram1l1Q8QZR0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tram1l1Q8QZR0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tram1l1Q8QZR0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Tram1l1Q8QZR0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tram1l1Q8QZR0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tram1l1Q8QZR0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tram1l1Q8QZR0 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tram1l1Q8QZR0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tram1l1Q8QZR0 Gm10493-201ENSMUST00000097270 612 ntBASIC20.17■□□□□ 0.82
Tram1l1Q8QZR0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Tram1l1Q8QZR0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tram1l1Q8QZR0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Tram1l1Q8QZR0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tram1l1Q8QZR0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Tram1l1Q8QZR0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.17■□□□□ 0.82
Tram1l1Q8QZR0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Tram1l1Q8QZR0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tram1l1Q8QZR0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tram1l1Q8QZR0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tram1l1Q8QZR0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tram1l1Q8QZR0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.16■□□□□ 0.82
Tram1l1Q8QZR0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tram1l1Q8QZR0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Tram1l1Q8QZR0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.16■□□□□ 0.82
Tram1l1Q8QZR0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tram1l1Q8QZR0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tram1l1Q8QZR0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms