Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Sf3a1Q8K4Z5 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Sf3a1Q8K4Z5 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Sf3a1Q8K4Z5 Gm9207-201ENSMUST00000198773 1115 ntBASIC24.61■■□□□ 1.53
Sf3a1Q8K4Z5 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Sf3a1Q8K4Z5 AC140930.3-201ENSMUST00000222935 274 ntBASIC24.61■■□□□ 1.53
Sf3a1Q8K4Z5 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Sf3a1Q8K4Z5 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
Sf3a1Q8K4Z5 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Sf3a1Q8K4Z5 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Sf3a1Q8K4Z5 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Sf3a1Q8K4Z5 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Sf3a1Q8K4Z5 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
Sf3a1Q8K4Z5 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Sf3a1Q8K4Z5 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC24.6■■□□□ 1.53
Sf3a1Q8K4Z5 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Sf3a1Q8K4Z5 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
Sf3a1Q8K4Z5 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Sf3a1Q8K4Z5 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Sf3a1Q8K4Z5 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Sf3a1Q8K4Z5 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Sf3a1Q8K4Z5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC24.59■■□□□ 1.53
Sf3a1Q8K4Z5 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Sf3a1Q8K4Z5 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Sf3a1Q8K4Z5 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC24.59■■□□□ 1.53
Sf3a1Q8K4Z5 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Sf3a1Q8K4Z5 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Sf3a1Q8K4Z5 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
Sf3a1Q8K4Z5 Snhg20-203ENSMUST00000182811 2153 ntBASIC24.59■■□□□ 1.53
Sf3a1Q8K4Z5 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Sf3a1Q8K4Z5 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Sf3a1Q8K4Z5 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Sf3a1Q8K4Z5 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Sf3a1Q8K4Z5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Sf3a1Q8K4Z5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Sf3a1Q8K4Z5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Sf3a1Q8K4Z5 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
Sf3a1Q8K4Z5 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Sf3a1Q8K4Z5 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
Sf3a1Q8K4Z5 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Sf3a1Q8K4Z5 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Sf3a1Q8K4Z5 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Sf3a1Q8K4Z5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Sf3a1Q8K4Z5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Sf3a1Q8K4Z5 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Sf3a1Q8K4Z5 Gm43006-201ENSMUST00000197702 1602 ntBASIC24.57■■□□□ 1.52
Sf3a1Q8K4Z5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Sf3a1Q8K4Z5 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Sf3a1Q8K4Z5 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Sf3a1Q8K4Z5 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Sf3a1Q8K4Z5 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Sf3a1Q8K4Z5 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Sf3a1Q8K4Z5 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Sf3a1Q8K4Z5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Sf3a1Q8K4Z5 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Sf3a1Q8K4Z5 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC24.55■■□□□ 1.52
Sf3a1Q8K4Z5 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC24.55■■□□□ 1.52
Sf3a1Q8K4Z5 Gm43759-201ENSMUST00000196925 1261 ntBASIC24.55■■□□□ 1.52
Sf3a1Q8K4Z5 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Sf3a1Q8K4Z5 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC24.55■■□□□ 1.52
Sf3a1Q8K4Z5 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Sf3a1Q8K4Z5 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Sf3a1Q8K4Z5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Sf3a1Q8K4Z5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
Sf3a1Q8K4Z5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Sf3a1Q8K4Z5 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Sf3a1Q8K4Z5 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Sf3a1Q8K4Z5 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Sf3a1Q8K4Z5 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Sf3a1Q8K4Z5 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Sf3a1Q8K4Z5 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Sf3a1Q8K4Z5 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Sf3a1Q8K4Z5 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Sf3a1Q8K4Z5 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Sf3a1Q8K4Z5 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Sf3a1Q8K4Z5 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Sf3a1Q8K4Z5 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Sf3a1Q8K4Z5 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Sf3a1Q8K4Z5 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Sf3a1Q8K4Z5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Sf3a1Q8K4Z5 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Sf3a1Q8K4Z5 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Sf3a1Q8K4Z5 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
Sf3a1Q8K4Z5 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Sf3a1Q8K4Z5 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Sf3a1Q8K4Z5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Sf3a1Q8K4Z5 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Sf3a1Q8K4Z5 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Sf3a1Q8K4Z5 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Sf3a1Q8K4Z5 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Sf3a1Q8K4Z5 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Sf3a1Q8K4Z5 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Sf3a1Q8K4Z5 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC24.51■■□□□ 1.51
Sf3a1Q8K4Z5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Sf3a1Q8K4Z5 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Sf3a1Q8K4Z5 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
Sf3a1Q8K4Z5 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Sf3a1Q8K4Z5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Sf3a1Q8K4Z5 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Sf3a1Q8K4Z5 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms