Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ddx54Q8K4L0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Ddx54Q8K4L0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
Ddx54Q8K4L0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC26.74■■□□□ 1.87
Ddx54Q8K4L0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
Ddx54Q8K4L0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
Ddx54Q8K4L0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ddx54Q8K4L0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ddx54Q8K4L0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ddx54Q8K4L0 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ddx54Q8K4L0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC26.73■■□□□ 1.87
Ddx54Q8K4L0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC26.72■■□□□ 1.87
Ddx54Q8K4L0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Ddx54Q8K4L0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Ddx54Q8K4L0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Ddx54Q8K4L0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
Ddx54Q8K4L0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC26.71■■□□□ 1.87
Ddx54Q8K4L0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ddx54Q8K4L0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Ddx54Q8K4L0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
Ddx54Q8K4L0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Ddx54Q8K4L0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
Ddx54Q8K4L0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.87
Ddx54Q8K4L0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.87
Ddx54Q8K4L0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Ddx54Q8K4L0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Ddx54Q8K4L0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Ddx54Q8K4L0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC26.7■■□□□ 1.86
Ddx54Q8K4L0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Ddx54Q8K4L0 Gm13168-201ENSMUST00000121771 632 ntBASIC26.7■■□□□ 1.86
Ddx54Q8K4L0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC26.7■■□□□ 1.86
Ddx54Q8K4L0 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
Ddx54Q8K4L0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Ddx54Q8K4L0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Ddx54Q8K4L0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
Ddx54Q8K4L0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
Ddx54Q8K4L0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Ddx54Q8K4L0 Gm7977-201ENSMUST00000193787 748 ntBASIC26.69■■□□□ 1.86
Ddx54Q8K4L0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC26.69■■□□□ 1.86
Ddx54Q8K4L0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC26.69■■□□□ 1.86
Ddx54Q8K4L0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ddx54Q8K4L0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Ddx54Q8K4L0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ddx54Q8K4L0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ddx54Q8K4L0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Ddx54Q8K4L0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC26.68■■□□□ 1.86
Ddx54Q8K4L0 AC135963.1-201ENSMUST00000211640 717 ntBASIC26.68■■□□□ 1.86
Ddx54Q8K4L0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Ddx54Q8K4L0 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
Ddx54Q8K4L0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
Ddx54Q8K4L0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ddx54Q8K4L0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC26.67■■□□□ 1.86
Ddx54Q8K4L0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ddx54Q8K4L0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ddx54Q8K4L0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC26.67■■□□□ 1.86
Ddx54Q8K4L0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Ddx54Q8K4L0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ddx54Q8K4L0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Ddx54Q8K4L0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
Ddx54Q8K4L0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Ddx54Q8K4L0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ddx54Q8K4L0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Ddx54Q8K4L0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
Ddx54Q8K4L0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ddx54Q8K4L0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ddx54Q8K4L0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Ddx54Q8K4L0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC26.66■■□□□ 1.86
Ddx54Q8K4L0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ddx54Q8K4L0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ddx54Q8K4L0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Ddx54Q8K4L0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Ddx54Q8K4L0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC26.64■■□□□ 1.86
Ddx54Q8K4L0 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Ddx54Q8K4L0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Ddx54Q8K4L0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Ddx54Q8K4L0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Ddx54Q8K4L0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Ddx54Q8K4L0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
Ddx54Q8K4L0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ddx54Q8K4L0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
Ddx54Q8K4L0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC26.63■■□□□ 1.85
Ddx54Q8K4L0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC26.63■■□□□ 1.85
Ddx54Q8K4L0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC26.63■■□□□ 1.85
Ddx54Q8K4L0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC26.63■■□□□ 1.85
Ddx54Q8K4L0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ddx54Q8K4L0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
Ddx54Q8K4L0 Gm27801-201ENSMUST00000184174 223 ntBASIC26.62■■□□□ 1.85
Ddx54Q8K4L0 Mir6982-201ENSMUST00000184354 68 ntBASIC26.62■■□□□ 1.85
Ddx54Q8K4L0 Gm5408-201ENSMUST00000197998 747 ntBASIC26.62■■□□□ 1.85
Ddx54Q8K4L0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
Ddx54Q8K4L0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ddx54Q8K4L0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ddx54Q8K4L0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ddx54Q8K4L0 Gm10812-201ENSMUST00000099864 546 ntBASIC26.61■■□□□ 1.85
Ddx54Q8K4L0 Gm43859-201ENSMUST00000200075 1412 ntBASIC26.61■■□□□ 1.85
Ddx54Q8K4L0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Ddx54Q8K4L0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ddx54Q8K4L0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ddx54Q8K4L0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Ddx54Q8K4L0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms