Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps50Q8CI71 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Vps50Q8CI71 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps50Q8CI71 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vps50Q8CI71 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Vps50Q8CI71 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps50Q8CI71 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps50Q8CI71 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Vps50Q8CI71 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps50Q8CI71 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Vps50Q8CI71 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.6■□□□□ 0.73
Vps50Q8CI71 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Vps50Q8CI71 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps50Q8CI71 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps50Q8CI71 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Vps50Q8CI71 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.6■□□□□ 0.73
Vps50Q8CI71 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps50Q8CI71 Gm13241-201ENSMUST00000094493 780 ntBASIC19.6■□□□□ 0.73
Vps50Q8CI71 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps50Q8CI71 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Vps50Q8CI71 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vps50Q8CI71 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Vps50Q8CI71 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps50Q8CI71 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps50Q8CI71 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps50Q8CI71 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps50Q8CI71 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps50Q8CI71 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.59■□□□□ 0.73
Vps50Q8CI71 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vps50Q8CI71 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Vps50Q8CI71 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
Vps50Q8CI71 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vps50Q8CI71 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vps50Q8CI71 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Vps50Q8CI71 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Vps50Q8CI71 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vps50Q8CI71 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vps50Q8CI71 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vps50Q8CI71 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vps50Q8CI71 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Vps50Q8CI71 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Vps50Q8CI71 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps50Q8CI71 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps50Q8CI71 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps50Q8CI71 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Vps50Q8CI71 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Vps50Q8CI71 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps50Q8CI71 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.57■□□□□ 0.72
Vps50Q8CI71 Gm9847-201ENSMUST00000052528 599 ntBASIC19.57■□□□□ 0.72
Vps50Q8CI71 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps50Q8CI71 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps50Q8CI71 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps50Q8CI71 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vps50Q8CI71 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps50Q8CI71 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Vps50Q8CI71 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Vps50Q8CI71 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Vps50Q8CI71 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Vps50Q8CI71 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps50Q8CI71 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vps50Q8CI71 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps50Q8CI71 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps50Q8CI71 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Vps50Q8CI71 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vps50Q8CI71 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Vps50Q8CI71 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps50Q8CI71 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps50Q8CI71 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vps50Q8CI71 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Vps50Q8CI71 Golph3-202ENSMUST00000226517 2359 ntBASIC19.55■□□□□ 0.72
Vps50Q8CI71 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps50Q8CI71 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps50Q8CI71 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps50Q8CI71 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Vps50Q8CI71 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Vps50Q8CI71 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps50Q8CI71 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.54■□□□□ 0.72
Vps50Q8CI71 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps50Q8CI71 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Vps50Q8CI71 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.54■□□□□ 0.72
Vps50Q8CI71 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps50Q8CI71 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps50Q8CI71 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps50Q8CI71 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vps50Q8CI71 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps50Q8CI71 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps50Q8CI71 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps50Q8CI71 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Vps50Q8CI71 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Vps50Q8CI71 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Vps50Q8CI71 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps50Q8CI71 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps50Q8CI71 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Vps50Q8CI71 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps50Q8CI71 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Vps50Q8CI71 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps50Q8CI71 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vps50Q8CI71 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps50Q8CI71 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.52■□□□□ 0.72
Vps50Q8CI71 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms