Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Zc3h3Q8CHP0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Zc3h3Q8CHP0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Zc3h3Q8CHP0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Zc3h3Q8CHP0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Zc3h3Q8CHP0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Zc3h3Q8CHP0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.96■□□□□ 0.79
Zc3h3Q8CHP0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Zc3h3Q8CHP0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.96■□□□□ 0.79
Zc3h3Q8CHP0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Zc3h3Q8CHP0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.96■□□□□ 0.79
Zc3h3Q8CHP0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Zc3h3Q8CHP0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Zc3h3Q8CHP0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.95■□□□□ 0.79
Zc3h3Q8CHP0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Zc3h3Q8CHP0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Zc3h3Q8CHP0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.95■□□□□ 0.78
Zc3h3Q8CHP0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Zc3h3Q8CHP0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Zc3h3Q8CHP0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Zc3h3Q8CHP0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.95■□□□□ 0.78
Zc3h3Q8CHP0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Zc3h3Q8CHP0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Zc3h3Q8CHP0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Zc3h3Q8CHP0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Zc3h3Q8CHP0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Zc3h3Q8CHP0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Zc3h3Q8CHP0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Zc3h3Q8CHP0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.94■□□□□ 0.78
Zc3h3Q8CHP0 Gm5408-201ENSMUST00000197998 747 ntBASIC19.94■□□□□ 0.78
Zc3h3Q8CHP0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.94■□□□□ 0.78
Zc3h3Q8CHP0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Zc3h3Q8CHP0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Zc3h3Q8CHP0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Zc3h3Q8CHP0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Zc3h3Q8CHP0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Zc3h3Q8CHP0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.93■□□□□ 0.78
Zc3h3Q8CHP0 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Zc3h3Q8CHP0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Zc3h3Q8CHP0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Zc3h3Q8CHP0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Zc3h3Q8CHP0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Zc3h3Q8CHP0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Zc3h3Q8CHP0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Zc3h3Q8CHP0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Zc3h3Q8CHP0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Zc3h3Q8CHP0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.93■□□□□ 0.78
Zc3h3Q8CHP0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Zc3h3Q8CHP0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Zc3h3Q8CHP0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zc3h3Q8CHP0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zc3h3Q8CHP0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Zc3h3Q8CHP0 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.91■□□□□ 0.78
Zc3h3Q8CHP0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Zc3h3Q8CHP0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zc3h3Q8CHP0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zc3h3Q8CHP0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.91■□□□□ 0.78
Zc3h3Q8CHP0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Zc3h3Q8CHP0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Zc3h3Q8CHP0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Zc3h3Q8CHP0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Zc3h3Q8CHP0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
Zc3h3Q8CHP0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Zc3h3Q8CHP0 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.9■□□□□ 0.78
Zc3h3Q8CHP0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.9■□□□□ 0.78
Zc3h3Q8CHP0 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.9■□□□□ 0.78
Zc3h3Q8CHP0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Zc3h3Q8CHP0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Zc3h3Q8CHP0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.9■□□□□ 0.78
Zc3h3Q8CHP0 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.9■□□□□ 0.78
Zc3h3Q8CHP0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Zc3h3Q8CHP0 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Zc3h3Q8CHP0 Gm20049-201ENSMUST00000219950 730 ntBASIC19.89■□□□□ 0.77
Zc3h3Q8CHP0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Zc3h3Q8CHP0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Zc3h3Q8CHP0 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Zc3h3Q8CHP0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Zc3h3Q8CHP0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zc3h3Q8CHP0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zc3h3Q8CHP0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zc3h3Q8CHP0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.88■□□□□ 0.77
Zc3h3Q8CHP0 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.88■□□□□ 0.77
Zc3h3Q8CHP0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Zc3h3Q8CHP0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Zc3h3Q8CHP0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Zc3h3Q8CHP0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Zc3h3Q8CHP0 Gm13148-201ENSMUST00000118892 745 ntBASIC19.87■□□□□ 0.77
Zc3h3Q8CHP0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.87■□□□□ 0.77
Zc3h3Q8CHP0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Zc3h3Q8CHP0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.87■□□□□ 0.77
Zc3h3Q8CHP0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Zc3h3Q8CHP0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Zc3h3Q8CHP0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Zc3h3Q8CHP0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.86■□□□□ 0.77
Zc3h3Q8CHP0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.86■□□□□ 0.77
Zc3h3Q8CHP0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.86■□□□□ 0.77
Zc3h3Q8CHP0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.86■□□□□ 0.77
Zc3h3Q8CHP0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Zc3h3Q8CHP0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Zc3h3Q8CHP0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms