Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
ShfQ8CG80 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ShfQ8CG80 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ShfQ8CG80 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ShfQ8CG80 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ShfQ8CG80 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
ShfQ8CG80 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.99■□□□□ 0.47
ShfQ8CG80 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ShfQ8CG80 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ShfQ8CG80 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ShfQ8CG80 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ShfQ8CG80 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ShfQ8CG80 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ShfQ8CG80 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.98■□□□□ 0.47
ShfQ8CG80 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.98■□□□□ 0.47
ShfQ8CG80 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
ShfQ8CG80 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ShfQ8CG80 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ShfQ8CG80 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ShfQ8CG80 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ShfQ8CG80 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ShfQ8CG80 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ShfQ8CG80 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ShfQ8CG80 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ShfQ8CG80 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ShfQ8CG80 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ShfQ8CG80 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ShfQ8CG80 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ShfQ8CG80 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
ShfQ8CG80 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ShfQ8CG80 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ShfQ8CG80 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ShfQ8CG80 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ShfQ8CG80 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
ShfQ8CG80 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ShfQ8CG80 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ShfQ8CG80 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ShfQ8CG80 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ShfQ8CG80 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ShfQ8CG80 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ShfQ8CG80 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ShfQ8CG80 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ShfQ8CG80 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ShfQ8CG80 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ShfQ8CG80 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ShfQ8CG80 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ShfQ8CG80 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
ShfQ8CG80 Golph3-202ENSMUST00000226517 2359 ntBASIC17.95■□□□□ 0.46
ShfQ8CG80 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.95■□□□□ 0.46
ShfQ8CG80 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.95■□□□□ 0.46
ShfQ8CG80 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ShfQ8CG80 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ShfQ8CG80 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ShfQ8CG80 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
ShfQ8CG80 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.94■□□□□ 0.46
ShfQ8CG80 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.94■□□□□ 0.46
ShfQ8CG80 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ShfQ8CG80 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ShfQ8CG80 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ShfQ8CG80 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ShfQ8CG80 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
ShfQ8CG80 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ShfQ8CG80 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ShfQ8CG80 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ShfQ8CG80 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ShfQ8CG80 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ShfQ8CG80 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.93■□□□□ 0.46
ShfQ8CG80 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ShfQ8CG80 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ShfQ8CG80 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ShfQ8CG80 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ShfQ8CG80 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.93■□□□□ 0.46
ShfQ8CG80 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ShfQ8CG80 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.92■□□□□ 0.46
ShfQ8CG80 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ShfQ8CG80 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ShfQ8CG80 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ShfQ8CG80 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ShfQ8CG80 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.92■□□□□ 0.46
ShfQ8CG80 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ShfQ8CG80 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ShfQ8CG80 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
ShfQ8CG80 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
ShfQ8CG80 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ShfQ8CG80 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ShfQ8CG80 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ShfQ8CG80 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ShfQ8CG80 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ShfQ8CG80 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ShfQ8CG80 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ShfQ8CG80 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ShfQ8CG80 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ShfQ8CG80 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ShfQ8CG80 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ShfQ8CG80 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ShfQ8CG80 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.9■□□□□ 0.46
ShfQ8CG80 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.9■□□□□ 0.46
ShfQ8CG80 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ShfQ8CG80 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ShfQ8CG80 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms