Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC25.06■■□□□ 1.6
Smc5Q8CG46 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Smc5Q8CG46 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC25.06■■□□□ 1.6
Smc5Q8CG46 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC25.06■■□□□ 1.6
Smc5Q8CG46 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Smc5Q8CG46 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
Smc5Q8CG46 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Smc5Q8CG46 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Smc5Q8CG46 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
Smc5Q8CG46 AC166356.1-201ENSMUST00000228236 1426 ntBASIC25.05■■□□□ 1.6
Smc5Q8CG46 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
Smc5Q8CG46 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Smc5Q8CG46 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Smc5Q8CG46 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC25.05■■□□□ 1.6
Smc5Q8CG46 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Smc5Q8CG46 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Smc5Q8CG46 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Smc5Q8CG46 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
Smc5Q8CG46 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Smc5Q8CG46 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Smc5Q8CG46 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Smc5Q8CG46 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Smc5Q8CG46 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Smc5Q8CG46 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Smc5Q8CG46 Gm5921-201ENSMUST00000075898 882 ntBASIC25.02■■□□□ 1.6
Smc5Q8CG46 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Smc5Q8CG46 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Smc5Q8CG46 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Smc5Q8CG46 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Smc5Q8CG46 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Smc5Q8CG46 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC25.01■■□□□ 1.59
Smc5Q8CG46 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC25.01■■□□□ 1.59
Smc5Q8CG46 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Smc5Q8CG46 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Smc5Q8CG46 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC25.01■■□□□ 1.59
Smc5Q8CG46 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Smc5Q8CG46 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC25■■□□□ 1.59
Smc5Q8CG46 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Smc5Q8CG46 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Smc5Q8CG46 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
Smc5Q8CG46 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Smc5Q8CG46 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Smc5Q8CG46 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
Smc5Q8CG46 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
Smc5Q8CG46 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Smc5Q8CG46 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
Smc5Q8CG46 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Smc5Q8CG46 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC24.98■■□□□ 1.59
Smc5Q8CG46 Gm7143-201ENSMUST00000222811 859 ntBASIC24.98■■□□□ 1.59
Smc5Q8CG46 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC24.98■■□□□ 1.59
Smc5Q8CG46 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Smc5Q8CG46 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Smc5Q8CG46 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Smc5Q8CG46 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Smc5Q8CG46 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC24.97■■□□□ 1.59
Smc5Q8CG46 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Smc5Q8CG46 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Smc5Q8CG46 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Smc5Q8CG46 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Smc5Q8CG46 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
Smc5Q8CG46 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC24.96■■□□□ 1.59
Smc5Q8CG46 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Smc5Q8CG46 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Smc5Q8CG46 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
Smc5Q8CG46 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Smc5Q8CG46 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Smc5Q8CG46 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Smc5Q8CG46 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC24.95■■□□□ 1.58
Smc5Q8CG46 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC24.95■■□□□ 1.58
Smc5Q8CG46 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Smc5Q8CG46 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
Smc5Q8CG46 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Smc5Q8CG46 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Smc5Q8CG46 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC24.94■■□□□ 1.58
Smc5Q8CG46 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Smc5Q8CG46 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Smc5Q8CG46 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Smc5Q8CG46 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
Smc5Q8CG46 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
Smc5Q8CG46 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
Smc5Q8CG46 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC24.93■■□□□ 1.58
Smc5Q8CG46 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC24.93■■□□□ 1.58
Smc5Q8CG46 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Smc5Q8CG46 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Smc5Q8CG46 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Smc5Q8CG46 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC24.93■■□□□ 1.58
Smc5Q8CG46 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Smc5Q8CG46 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
Smc5Q8CG46 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Smc5Q8CG46 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Smc5Q8CG46 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC24.91■■□□□ 1.58
Smc5Q8CG46 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Smc5Q8CG46 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Smc5Q8CG46 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Smc5Q8CG46 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Smc5Q8CG46 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Smc5Q8CG46 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Smc5Q8CG46 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Smc5Q8CG46 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
Smc5Q8CG46 Gm10232-201ENSMUST00000089221 720 ntBASIC24.9■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 190.7 ms