Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cfap54Q8C6S9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cfap54Q8C6S9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cfap54Q8C6S9 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.61■□□□□ 0.73
Cfap54Q8C6S9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cfap54Q8C6S9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cfap54Q8C6S9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.61■□□□□ 0.73
Cfap54Q8C6S9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cfap54Q8C6S9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cfap54Q8C6S9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cfap54Q8C6S9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cfap54Q8C6S9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.61■□□□□ 0.73
Cfap54Q8C6S9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Cfap54Q8C6S9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfap54Q8C6S9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Cfap54Q8C6S9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfap54Q8C6S9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cfap54Q8C6S9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.6■□□□□ 0.73
Cfap54Q8C6S9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.6■□□□□ 0.73
Cfap54Q8C6S9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.59■□□□□ 0.73
Cfap54Q8C6S9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cfap54Q8C6S9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.59■□□□□ 0.73
Cfap54Q8C6S9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cfap54Q8C6S9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cfap54Q8C6S9 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cfap54Q8C6S9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cfap54Q8C6S9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cfap54Q8C6S9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Cfap54Q8C6S9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cfap54Q8C6S9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Cfap54Q8C6S9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cfap54Q8C6S9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cfap54Q8C6S9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cfap54Q8C6S9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cfap54Q8C6S9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cfap54Q8C6S9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cfap54Q8C6S9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cfap54Q8C6S9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cfap54Q8C6S9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cfap54Q8C6S9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.58■□□□□ 0.72
Cfap54Q8C6S9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.58■□□□□ 0.72
Cfap54Q8C6S9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Cfap54Q8C6S9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.57■□□□□ 0.72
Cfap54Q8C6S9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.57■□□□□ 0.72
Cfap54Q8C6S9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cfap54Q8C6S9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cfap54Q8C6S9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.57■□□□□ 0.72
Cfap54Q8C6S9 Reep4-203ENSMUST00000226563 1444 ntBASIC19.57■□□□□ 0.72
Cfap54Q8C6S9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cfap54Q8C6S9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cfap54Q8C6S9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cfap54Q8C6S9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cfap54Q8C6S9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.56■□□□□ 0.72
Cfap54Q8C6S9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cfap54Q8C6S9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cfap54Q8C6S9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cfap54Q8C6S9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.55■□□□□ 0.72
Cfap54Q8C6S9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cfap54Q8C6S9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cfap54Q8C6S9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cfap54Q8C6S9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cfap54Q8C6S9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.55■□□□□ 0.72
Cfap54Q8C6S9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cfap54Q8C6S9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cfap54Q8C6S9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cfap54Q8C6S9 Gm13148-201ENSMUST00000118892 745 ntBASIC19.54■□□□□ 0.72
Cfap54Q8C6S9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.54■□□□□ 0.72
Cfap54Q8C6S9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cfap54Q8C6S9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cfap54Q8C6S9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cfap54Q8C6S9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cfap54Q8C6S9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cfap54Q8C6S9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.54■□□□□ 0.72
Cfap54Q8C6S9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.54■□□□□ 0.72
Cfap54Q8C6S9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.54■□□□□ 0.72
Cfap54Q8C6S9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cfap54Q8C6S9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cfap54Q8C6S9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cfap54Q8C6S9 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cfap54Q8C6S9 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cfap54Q8C6S9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cfap54Q8C6S9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cfap54Q8C6S9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cfap54Q8C6S9 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.52■□□□□ 0.72
Cfap54Q8C6S9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cfap54Q8C6S9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cfap54Q8C6S9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Cfap54Q8C6S9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cfap54Q8C6S9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Cfap54Q8C6S9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cfap54Q8C6S9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Cfap54Q8C6S9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap54Q8C6S9 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap54Q8C6S9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Cfap54Q8C6S9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap54Q8C6S9 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap54Q8C6S9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap54Q8C6S9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap54Q8C6S9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cfap54Q8C6S9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms