Protein–RNA interactions for Protein: Q8C4Y3

Nelfb, Negative elongation factor B, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NelfbQ8C4Y3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
NelfbQ8C4Y3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
NelfbQ8C4Y3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
NelfbQ8C4Y3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
NelfbQ8C4Y3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
NelfbQ8C4Y3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
NelfbQ8C4Y3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NelfbQ8C4Y3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
NelfbQ8C4Y3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NelfbQ8C4Y3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.26■■□□□ 1.15
NelfbQ8C4Y3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NelfbQ8C4Y3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NelfbQ8C4Y3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NelfbQ8C4Y3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NelfbQ8C4Y3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
NelfbQ8C4Y3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
NelfbQ8C4Y3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22.25■■□□□ 1.15
NelfbQ8C4Y3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.25■■□□□ 1.15
NelfbQ8C4Y3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NelfbQ8C4Y3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
NelfbQ8C4Y3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
NelfbQ8C4Y3 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NelfbQ8C4Y3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NelfbQ8C4Y3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NelfbQ8C4Y3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NelfbQ8C4Y3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NelfbQ8C4Y3 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NelfbQ8C4Y3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NelfbQ8C4Y3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NelfbQ8C4Y3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
NelfbQ8C4Y3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.24■■□□□ 1.15
NelfbQ8C4Y3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NelfbQ8C4Y3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NelfbQ8C4Y3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NelfbQ8C4Y3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
NelfbQ8C4Y3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NelfbQ8C4Y3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC22.23■■□□□ 1.15
NelfbQ8C4Y3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NelfbQ8C4Y3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
NelfbQ8C4Y3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NelfbQ8C4Y3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC22.23■■□□□ 1.15
NelfbQ8C4Y3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
NelfbQ8C4Y3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
NelfbQ8C4Y3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NelfbQ8C4Y3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NelfbQ8C4Y3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NelfbQ8C4Y3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NelfbQ8C4Y3 Gm15820-201ENSMUST00000201566 728 ntBASIC22.22■■□□□ 1.15
NelfbQ8C4Y3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NelfbQ8C4Y3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
NelfbQ8C4Y3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NelfbQ8C4Y3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
NelfbQ8C4Y3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
NelfbQ8C4Y3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NelfbQ8C4Y3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NelfbQ8C4Y3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC22.21■■□□□ 1.15
NelfbQ8C4Y3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
NelfbQ8C4Y3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NelfbQ8C4Y3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NelfbQ8C4Y3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
NelfbQ8C4Y3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.2■■□□□ 1.14
NelfbQ8C4Y3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.2■■□□□ 1.14
NelfbQ8C4Y3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NelfbQ8C4Y3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
NelfbQ8C4Y3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NelfbQ8C4Y3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC22.2■■□□□ 1.14
NelfbQ8C4Y3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NelfbQ8C4Y3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
NelfbQ8C4Y3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NelfbQ8C4Y3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NelfbQ8C4Y3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
NelfbQ8C4Y3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
NelfbQ8C4Y3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
NelfbQ8C4Y3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
NelfbQ8C4Y3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NelfbQ8C4Y3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NelfbQ8C4Y3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
NelfbQ8C4Y3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
NelfbQ8C4Y3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NelfbQ8C4Y3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NelfbQ8C4Y3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NelfbQ8C4Y3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NelfbQ8C4Y3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NelfbQ8C4Y3 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.18■■□□□ 1.14
NelfbQ8C4Y3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
NelfbQ8C4Y3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
NelfbQ8C4Y3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NelfbQ8C4Y3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NelfbQ8C4Y3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NelfbQ8C4Y3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC22.17■■□□□ 1.14
NelfbQ8C4Y3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NelfbQ8C4Y3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
NelfbQ8C4Y3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC22.17■■□□□ 1.14
NelfbQ8C4Y3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
NelfbQ8C4Y3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
NelfbQ8C4Y3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
NelfbQ8C4Y3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NelfbQ8C4Y3 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
NelfbQ8C4Y3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.16■■□□□ 1.14
NelfbQ8C4Y3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms