Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm43034-201ENSMUST00000198678 1364 ntBASIC25.73■■□□□ 1.71
Ccdc60Q8C4J0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC25.73■■□□□ 1.71
Ccdc60Q8C4J0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC25.73■■□□□ 1.71
Ccdc60Q8C4J0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC25.73■■□□□ 1.71
Ccdc60Q8C4J0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Ccdc60Q8C4J0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Ccdc60Q8C4J0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Ccdc60Q8C4J0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
Ccdc60Q8C4J0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC25.72■■□□□ 1.71
Ccdc60Q8C4J0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ccdc60Q8C4J0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Ccdc60Q8C4J0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Ccdc60Q8C4J0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Ccdc60Q8C4J0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Ccdc60Q8C4J0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Ccdc60Q8C4J0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Ccdc60Q8C4J0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Ccdc60Q8C4J0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Ccdc60Q8C4J0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC25.7■■□□□ 1.7
Ccdc60Q8C4J0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Ccdc60Q8C4J0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Ccdc60Q8C4J0 Gm37035-201ENSMUST00000194809 2148 ntBASIC25.7■■□□□ 1.7
Ccdc60Q8C4J0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Ccdc60Q8C4J0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Ccdc60Q8C4J0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC25.69■■□□□ 1.7
Ccdc60Q8C4J0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ccdc60Q8C4J0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ccdc60Q8C4J0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Ccdc60Q8C4J0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ccdc60Q8C4J0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
Ccdc60Q8C4J0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ccdc60Q8C4J0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC25.68■■□□□ 1.7
Ccdc60Q8C4J0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ccdc60Q8C4J0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Ccdc60Q8C4J0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC25.68■■□□□ 1.7
Ccdc60Q8C4J0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ccdc60Q8C4J0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
Ccdc60Q8C4J0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Ccdc60Q8C4J0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Ccdc60Q8C4J0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Ccdc60Q8C4J0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ccdc60Q8C4J0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ccdc60Q8C4J0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Ccdc60Q8C4J0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ccdc60Q8C4J0 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ccdc60Q8C4J0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Ccdc60Q8C4J0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC25.66■■□□□ 1.7
Ccdc60Q8C4J0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ccdc60Q8C4J0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
Ccdc60Q8C4J0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Ccdc60Q8C4J0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ccdc60Q8C4J0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ccdc60Q8C4J0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ccdc60Q8C4J0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ccdc60Q8C4J0 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ccdc60Q8C4J0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Ccdc60Q8C4J0 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ccdc60Q8C4J0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ccdc60Q8C4J0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Ccdc60Q8C4J0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Ccdc60Q8C4J0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
Ccdc60Q8C4J0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ccdc60Q8C4J0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ccdc60Q8C4J0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ccdc60Q8C4J0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Ccdc60Q8C4J0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC25.64■■□□□ 1.7
Ccdc60Q8C4J0 Gm43759-201ENSMUST00000196925 1261 ntBASIC25.64■■□□□ 1.7
Ccdc60Q8C4J0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Ccdc60Q8C4J0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Ccdc60Q8C4J0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
Ccdc60Q8C4J0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ccdc60Q8C4J0 Hsf1-207ENSMUST00000228371 2102 ntBASIC25.63■■□□□ 1.69
Ccdc60Q8C4J0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ccdc60Q8C4J0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ccdc60Q8C4J0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC25.63■■□□□ 1.69
Ccdc60Q8C4J0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Ccdc60Q8C4J0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ccdc60Q8C4J0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Ccdc60Q8C4J0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Ccdc60Q8C4J0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
Ccdc60Q8C4J0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ccdc60Q8C4J0 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC25.62■■□□□ 1.69
Ccdc60Q8C4J0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ccdc60Q8C4J0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Ccdc60Q8C4J0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
Ccdc60Q8C4J0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ccdc60Q8C4J0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC25.61■■□□□ 1.69
Ccdc60Q8C4J0 Mir6236-201ENSMUST00000184437 123 ntBASIC25.61■■□□□ 1.69
Ccdc60Q8C4J0 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ccdc60Q8C4J0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Ccdc60Q8C4J0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ccdc60Q8C4J0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ccdc60Q8C4J0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ccdc60Q8C4J0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
Ccdc60Q8C4J0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ccdc60Q8C4J0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC25.6■■□□□ 1.69
Ccdc60Q8C4J0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ccdc60Q8C4J0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ccdc60Q8C4J0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ccdc60Q8C4J0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms