Protein–RNA interactions for Protein: Q8BV16

Zfp398, Zinc finger protein 398, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp398Q8BV16 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.18■□□□□ 0.82
Zfp398Q8BV16 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Zfp398Q8BV16 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Zfp398Q8BV16 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Zfp398Q8BV16 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.17■□□□□ 0.82
Zfp398Q8BV16 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.17■□□□□ 0.82
Zfp398Q8BV16 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zfp398Q8BV16 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zfp398Q8BV16 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Zfp398Q8BV16 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Zfp398Q8BV16 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Zfp398Q8BV16 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Zfp398Q8BV16 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Zfp398Q8BV16 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zfp398Q8BV16 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zfp398Q8BV16 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.16■□□□□ 0.82
Zfp398Q8BV16 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zfp398Q8BV16 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zfp398Q8BV16 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zfp398Q8BV16 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Zfp398Q8BV16 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zfp398Q8BV16 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zfp398Q8BV16 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zfp398Q8BV16 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Zfp398Q8BV16 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Zfp398Q8BV16 Gm40881-201ENSMUST00000223397 166 ntBASIC20.15■□□□□ 0.82
Zfp398Q8BV16 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.15■□□□□ 0.82
Zfp398Q8BV16 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zfp398Q8BV16 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Zfp398Q8BV16 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Zfp398Q8BV16 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.15■□□□□ 0.82
Zfp398Q8BV16 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Zfp398Q8BV16 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Zfp398Q8BV16 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Zfp398Q8BV16 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Zfp398Q8BV16 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Zfp398Q8BV16 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Zfp398Q8BV16 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Zfp398Q8BV16 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Zfp398Q8BV16 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Zfp398Q8BV16 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Zfp398Q8BV16 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Zfp398Q8BV16 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Zfp398Q8BV16 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Zfp398Q8BV16 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.14■□□□□ 0.81
Zfp398Q8BV16 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Zfp398Q8BV16 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Zfp398Q8BV16 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Zfp398Q8BV16 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zfp398Q8BV16 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zfp398Q8BV16 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zfp398Q8BV16 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.13■□□□□ 0.81
Zfp398Q8BV16 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.13■□□□□ 0.81
Zfp398Q8BV16 Gm7143-201ENSMUST00000222811 859 ntBASIC20.13■□□□□ 0.81
Zfp398Q8BV16 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Zfp398Q8BV16 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zfp398Q8BV16 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Zfp398Q8BV16 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Zfp398Q8BV16 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Zfp398Q8BV16 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Zfp398Q8BV16 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Zfp398Q8BV16 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.12■□□□□ 0.81
Zfp398Q8BV16 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Zfp398Q8BV16 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Zfp398Q8BV16 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Zfp398Q8BV16 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Zfp398Q8BV16 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Zfp398Q8BV16 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Zfp398Q8BV16 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.11■□□□□ 0.81
Zfp398Q8BV16 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.11■□□□□ 0.81
Zfp398Q8BV16 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Zfp398Q8BV16 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Zfp398Q8BV16 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Zfp398Q8BV16 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Zfp398Q8BV16 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Zfp398Q8BV16 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Zfp398Q8BV16 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Zfp398Q8BV16 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Zfp398Q8BV16 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Zfp398Q8BV16 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Zfp398Q8BV16 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Zfp398Q8BV16 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Zfp398Q8BV16 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Zfp398Q8BV16 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Zfp398Q8BV16 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Zfp398Q8BV16 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Zfp398Q8BV16 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Zfp398Q8BV16 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Zfp398Q8BV16 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Zfp398Q8BV16 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Zfp398Q8BV16 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Zfp398Q8BV16 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Zfp398Q8BV16 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Zfp398Q8BV16 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Zfp398Q8BV16 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Zfp398Q8BV16 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.09■□□□□ 0.81
Zfp398Q8BV16 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Zfp398Q8BV16 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Zfp398Q8BV16 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Zfp398Q8BV16 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms