Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf4Q8BQZ5 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf4Q8BQZ5 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf4Q8BQZ5 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cpsf4Q8BQZ5 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf4Q8BQZ5 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf4Q8BQZ5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cpsf4Q8BQZ5 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf4Q8BQZ5 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf4Q8BQZ5 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf4Q8BQZ5 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.42■□□□□ 0.7
Cpsf4Q8BQZ5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf4Q8BQZ5 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Cpsf4Q8BQZ5 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf4Q8BQZ5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cpsf4Q8BQZ5 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf4Q8BQZ5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf4Q8BQZ5 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Cpsf4Q8BQZ5 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf4Q8BQZ5 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf4Q8BQZ5 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf4Q8BQZ5 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf4Q8BQZ5 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Cpsf4Q8BQZ5 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf4Q8BQZ5 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf4Q8BQZ5 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf4Q8BQZ5 Notumos-201ENSMUST00000151998 2659 ntBASIC19.41■□□□□ 0.7
Cpsf4Q8BQZ5 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf4Q8BQZ5 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.41■□□□□ 0.7
Cpsf4Q8BQZ5 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.41■□□□□ 0.7
Cpsf4Q8BQZ5 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf4Q8BQZ5 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpsf4Q8BQZ5 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpsf4Q8BQZ5 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpsf4Q8BQZ5 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpsf4Q8BQZ5 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.4■□□□□ 0.7
Cpsf4Q8BQZ5 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpsf4Q8BQZ5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpsf4Q8BQZ5 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cpsf4Q8BQZ5 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpsf4Q8BQZ5 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cpsf4Q8BQZ5 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cpsf4Q8BQZ5 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cpsf4Q8BQZ5 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cpsf4Q8BQZ5 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.39■□□□□ 0.69
Cpsf4Q8BQZ5 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cpsf4Q8BQZ5 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.39■□□□□ 0.69
Cpsf4Q8BQZ5 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Cpsf4Q8BQZ5 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cpsf4Q8BQZ5 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Cpsf4Q8BQZ5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cpsf4Q8BQZ5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpsf4Q8BQZ5 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpsf4Q8BQZ5 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cpsf4Q8BQZ5 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.38■□□□□ 0.69
Cpsf4Q8BQZ5 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.38■□□□□ 0.69
Cpsf4Q8BQZ5 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.38■□□□□ 0.69
Cpsf4Q8BQZ5 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpsf4Q8BQZ5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpsf4Q8BQZ5 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpsf4Q8BQZ5 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Cpsf4Q8BQZ5 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cpsf4Q8BQZ5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Cpsf4Q8BQZ5 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf4Q8BQZ5 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf4Q8BQZ5 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf4Q8BQZ5 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf4Q8BQZ5 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf4Q8BQZ5 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf4Q8BQZ5 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf4Q8BQZ5 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Cpsf4Q8BQZ5 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf4Q8BQZ5 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cpsf4Q8BQZ5 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf4Q8BQZ5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cpsf4Q8BQZ5 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf4Q8BQZ5 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Cpsf4Q8BQZ5 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cpsf4Q8BQZ5 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf4Q8BQZ5 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cpsf4Q8BQZ5 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf4Q8BQZ5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf4Q8BQZ5 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf4Q8BQZ5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf4Q8BQZ5 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cpsf4Q8BQZ5 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.36■□□□□ 0.69
Cpsf4Q8BQZ5 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf4Q8BQZ5 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf4Q8BQZ5 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cpsf4Q8BQZ5 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.35■□□□□ 0.69
Cpsf4Q8BQZ5 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Cpsf4Q8BQZ5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf4Q8BQZ5 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf4Q8BQZ5 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf4Q8BQZ5 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf4Q8BQZ5 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cpsf4Q8BQZ5 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf4Q8BQZ5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf4Q8BQZ5 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cpsf4Q8BQZ5 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms